RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 CFAP73A6NFT4 308 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 TRIM64A6NGJ6 449 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 TRIM64BA6NI03 449 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 GPR171O14626 319 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 ZNF208O43345 1280 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 TMCC2O75069 709 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 CNOT4O95628 575 aaKnown RBP13.34□□□□□ -0.27
SMAD6-203ENST00000558937 IGHV3-9P01782 118 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 IMPDH2P12268 514 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 UQCRBP14927 111 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 PAX1P15863 534 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 SLC1A3P43003 542 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 CRATP43155 626 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 POLR2JP52435 117 aaKnown RBP13.34□□□□□ -0.27
SMAD6-203ENST00000558937 SLC16A1P53985 500 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 LTBQ06643 244 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 BSPH1Q075Z2 132 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 PPA1Q15181 289 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 LIN52Q52LA3 116 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 RPS26P11Q5JNZ5 115 aaPredicted RBP13.34□□□□□ -0.27
SMAD6-203ENST00000558937 C6orf10Q5SRN2 563 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 AGBL2Q5U5Z8 902 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 CLEC9AQ6UXN8 241 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 VRK2Q86Y07 508 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 CCDC103Q8IW40 242 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 ZNF440Q8IYI8 595 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 MIER2Q8N344 545 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 ZNF433Q8N7K0 673 aaPredicted RBP13.34□□□□□ -0.27
SMAD6-203ENST00000558937 KBTBD8Q8NFY9 601 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 OR52P1PQ8NH57 321 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 NEUROG1Q92886 237 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 VPS33AQ96AX1 596 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 APH1AQ96BI3 265 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 DDIT4LQ96D03 193 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 ITCHQ96J02 903 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 ZNF701Q9NV72 531 aaPredicted RBP13.34□□□□□ -0.27
SMAD6-203ENST00000558937 CALML5Q9NZT1 146 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 TRAPPC4Q9Y296 219 aa13.34□□□□□ -0.27
SMAD6-203ENST00000558937 ZC3H12DA2A288 527 aaKnown RBP13.33□□□□□ -0.28
SMAD6-203ENST00000558937 FAM234BA2RU67 622 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 CDHR4A6H8M9 788 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 PGM3O95394 542 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 GKN3PP0CG01 181 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 GGT1P19440 569 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 NTF4P34130 210 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 CRISP3P54108 245 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 SLC35A1P78382 337 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 H3F3AP84243 136 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 TIMM23BQ5SRD1 257 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 FBXW9Q5XUX1 488 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 EPGNQ6UW88 154 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 UBE2J2Q8N2K1 259 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 SLC38A5Q8WUX1 472 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 FBXW5Q969U6 566 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 TMEM19Q96HH6 336 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 C7orf26Q96N11 449 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 BDH2Q9BUT1 245 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 RLIMQ9NVW2 624 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 NPAP1Q9NZP6 1156 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 LAMP3Q9UQV4 416 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 ZNF443Q9Y2A4 671 aaPredicted RBP13.33□□□□□ -0.28
SMAD6-203ENST00000558937 ZFHX3Q15911 3703 aa13.33□□□□□ -0.28
SMAD6-203ENST00000558937 NAV3Q8IVL0 2385 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 SMAD7O15105 426 aaKnown RBP13.32□□□□□ -0.28
SMAD6-203ENST00000558937 RAD51DO75771 328 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 HEXAP06865 529 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 TFPTP0C1Z6 253 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 ATP5J2P56134 94 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 RPS4XP62701 263 aaKnown RBP13.32□□□□□ -0.28
SMAD6-203ENST00000558937 ZNF672Q499Z4 452 aaPredicted RBP13.32□□□□□ -0.28
SMAD6-203ENST00000558937 RNF220Q5VTB9 566 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 SLC2A7Q6PXP3 512 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 CASP12Q6UXS9 341 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 GTF2H4Q92759 462 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 MUCL1Q96DR8 90 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 ADAM19Q9H013 955 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 PAIP1Q9H074 479 aaKnown RBP13.32□□□□□ -0.28
SMAD6-203ENST00000558937 MALT1Q9UDY8 824 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 FLVCR1Q9Y5Y0 555 aa13.32□□□□□ -0.28
SMAD6-203ENST00000558937 OR5H1A6NKK0 313 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 POLR3GO15318 223 aaPredicted RBP13.31□□□□□ -0.28
SMAD6-203ENST00000558937 EIF1BO60739 113 aaKnown RBP13.31□□□□□ -0.28
SMAD6-203ENST00000558937 MRPL33O75394 65 aaKnown RBP13.31□□□□□ -0.28
SMAD6-203ENST00000558937 LY6G6DO95868 133 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 THBS1P07996 1170 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 SOD3P08294 240 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 NUDT7P0C024 238 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 DANCRP0C864 163 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 HOXB9P17482 250 aaPredicted RBP13.31□□□□□ -0.28
SMAD6-203ENST00000558937 ACAA2P42765 397 aaKnown RBP13.31□□□□□ -0.28
SMAD6-203ENST00000558937 MRPL19P49406 292 aaKnown RBP13.31□□□□□ -0.28
SMAD6-203ENST00000558937 MAP2K6P52564 334 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 FOXG1P55316 489 aaPredicted RBP13.31□□□□□ -0.28
SMAD6-203ENST00000558937 STX1BP61266 288 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 PAQR6Q6TCH4 344 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 SSX8Q7RTT4 187 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 P2RY8Q86VZ1 359 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 CLIP4Q8N3C7 705 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 CADM2Q8N3J6 435 aa13.31□□□□□ -0.28
SMAD6-203ENST00000558937 LRRC8CQ8TDW0 803 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms