RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 NKX6-1P78426 367 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-208ENST00000558827 CEACAM7Q14002 265 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 LARS2Q15031 903 aaKnown RBP11.08□□□□□ -0.64
SMAD3-208ENST00000558827 OR7A5Q15622 319 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 LIN52Q52LA3 116 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF311Q5JNZ3 666 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 AP1ARQ63HQ0 302 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF704Q6ZNC4 412 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-208ENST00000558827 MSANTD1Q6ZTZ1 278 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 Q71RC1 249 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-208ENST00000558827 CMIPQ8IY22 773 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 TMEM99Q8N816 258 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 MBD6Q96DN6 1003 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 ZHX1-C8orf76Q96EF9 292 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 PERPQ96FX8 193 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 MAGEB18Q96M61 343 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 ALPK1Q96QP1 1244 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 CCL19Q99731 98 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 SMR3AQ99954 134 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 TACO1Q9BSH4 297 aaKnown RBP11.08□□□□□ -0.64
SMAD3-208ENST00000558827 C1QTNF6Q9BXI9 259 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 RSPO3Q9BXY4 272 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-208ENST00000558827 IKZF5Q9H5V7 419 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 VAPAQ9P0L0 249 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 TMEM181Q9P2C4 612 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF232Q9UNY5 417 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 NOSIPQ9Y314 301 aaKnown RBP11.08□□□□□ -0.64
SMAD3-208ENST00000558827 HDGFL3Q9Y3E1 203 aa11.08□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF469Q96JG9 3925 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-208ENST00000558827 A0A0G2JPF8 293 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF716A6NP11 495 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 HNRNPCL2B2RXH8 293 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 HNRNPCL3B7ZW38 293 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 HNRNPCL1O60812 293 aaKnown RBP11.07□□□□□ -0.64
SMAD3-208ENST00000558827 SMPD2O60906 423 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 GOSR1O95249 250 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 PMS2P2O95744 297 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 HNRNPCL4P0DMR1 293 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 PPP3CBP16298 524 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 HOXB9P17482 250 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-208ENST00000558827 PTNP21246 168 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 AQP1P29972 269 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 HTR3AP46098 478 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 COPZ1P61923 177 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 TXNL4AP83876 142 aaKnown RBP11.07□□□□□ -0.64
SMAD3-208ENST00000558827 ITGADQ13349 1161 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 SQLEQ14534 574 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 GCNT6Q5T4J0 391 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 ABLIM2Q6H8Q1 611 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 COMTD1Q86VU5 262 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 P3H2Q8IVL5 708 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 OR52E4Q8NGH9 312 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 AKAP1Q92667 903 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMAD3-208ENST00000558827 DDIT4LQ96D03 193 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 ADAM19Q9H013 955 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 CACYBPQ9HB71 228 aaKnown RBP11.07□□□□□ -0.64
SMAD3-208ENST00000558827 SLC52A3Q9NQ40 469 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 ADPRHL2Q9NX46 363 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 CALML5Q9NZT1 146 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 ALPK2Q86TB3 2170 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 DSPPQ9NZW4 1301 aa11.07□□□□□ -0.64
SMAD3-208ENST00000558827 VPS13CQ709C8 3753 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 A0A0G2JND7 137 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 CIB4A0PJX0 185 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 CCT8L1PA6NM43 557 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF724A8MTY0 619 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 TPST1O60507 370 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 RAD51DO75771 328 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 PGM3O95394 542 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 UQCRBP14927 111 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 CBLP22681 906 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 MAGEA8P43361 318 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 SLC35A1P78382 337 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 FAPQ12884 760 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 SELPLGQ14242 412 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 GLIPR1L2Q4G1C9 344 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 OTUD3Q5T2D3 398 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-208ENST00000558827 CASP12Q6UXS9 341 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 KRTAP1-3Q8IUG1 177 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF440Q8IYI8 595 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 KDM8Q8N371 416 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 PIGXQ8TBF5 258 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 RNF217Q8TC41 542 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 OIT3Q8WWZ8 545 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 APH1AQ96BI3 265 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 SLC25A36Q96CQ1 311 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 NAA11Q9BSU3 229 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-208ENST00000558827 SPATA9Q9BWV2 254 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 HDHD5Q9BXW7 423 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 GP6Q9HCN6 339 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 A4GALTQ9NPC4 353 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 BEX4Q9NWD9 120 aaPredicted RBP11.06□□□□□ -0.64
SMAD3-208ENST00000558827 EMC3Q9P0I2 261 aa11.06□□□□□ -0.64
SMAD3-208ENST00000558827 DPRXA6NFQ7 191 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 MRPL33O75394 65 aaKnown RBP11.05□□□□□ -0.64
SMAD3-208ENST00000558827 ARAFP10398 606 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 CDH2P19022 906 aaPredicted RBP11.05□□□□□ -0.64
SMAD3-208ENST00000558827 HOXC12P31275 282 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 IDUAP35475 653 aa11.05□□□□□ -0.64
SMAD3-208ENST00000558827 CDK6Q00534 326 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms