RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 HCAR1Q9BXC0 346 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 B3GNT4Q9C0J1 378 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 ADAM19Q9H013 955 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 CMC2Q9NRP2 79 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 RPS6KB2Q9UBS0 482 aa11.8□□□□□ -0.52
SMAD3-207ENST00000558763 LOC102723996A0A087X1L8 192 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 FAM183AA6NL82 134 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 SOCS6O14544 535 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 HCN1O60741 890 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 APOL3O95236 402 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 IGF2P01344 180 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 HMGN1P05114 100 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 TGFBR1P36897 503 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 MTNR1AP48039 350 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 ETV1P50549 477 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 CCR4P51679 360 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 COPZ1P61923 177 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 NCS1P62166 190 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 FOXK2Q01167 660 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 RAB40BQ12829 278 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 RTP5Q14D33 572 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 TGIF1Q15583 401 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 SSX1Q16384 188 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 ARMCX4Q5H9R4 360 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 NXNL2Q5VZ03 156 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 IGF2-ASQ6U949 168 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 LYPD8Q6UX82 237 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 OAFQ86UD1 273 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 CPOQ8IVL8 374 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 CDK20Q8IZL9 346 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 IL22RA1Q8N6P7 574 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 NANOGP1Q8N7R0 232 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 OR52L1Q8NGH7 329 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 OR8K3Q8NH51 312 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 NDNFQ8TB73 568 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 KISS1RQ969F8 398 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-207ENST00000558763 RNFT2Q96EX2 444 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 SH3YL1Q96HL8 342 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-207ENST00000558763 LPAR4Q99677 370 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 TMEM43Q9BTV4 400 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 SLC19A3Q9BZV2 496 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 NXT1Q9UKK6 140 aaKnown RBP11.79□□□□□ -0.52
SMAD3-207ENST00000558763 NPFFR2Q9Y5X5 522 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 TRBV11-1A0A0K0K1C0 115 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 J3QRE1 110 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 PPM1BO75688 479 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 DXOO77932 396 aaKnown RBP11.79□□□□□ -0.52
SMAD3-207ENST00000558763 GADD45AP24522 165 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 CD82P27701 267 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 DLSTP36957 453 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 SLC1A3P43003 542 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 RGS6P49758 472 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 CDH11P55287 796 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 VBP1P61758 197 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 PSPHP78330 225 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 PCOLCEQ15113 449 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 SLC35F1Q5T1Q4 408 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 NIPAL3Q6P499 406 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 CYP4Z2PQ8N1L4 340 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 TMCO5AQ8N6Q1 288 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 ZNF485Q8NCK3 441 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 PROKR2Q8NFJ6 384 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 TBC1D15Q8TC07 691 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 HGDQ93099 445 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 NKD1Q969G9 470 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 SGTBQ96EQ0 304 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 MGLLQ99685 303 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 FN3KQ9H479 309 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 CHRNA9Q9UGM1 479 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 WASF3Q9UPY6 502 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 HRH3Q9Y5N1 445 aa11.79□□□□□ -0.52
SMAD3-207ENST00000558763 LOC101059948A0A1B0GTJ6 334 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 GTPBP1O00178 669 aaKnown RBP11.78□□□□□ -0.52
SMAD3-207ENST00000558763 SLC22A1O15245 554 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 HCRTR2O43614 444 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 NDUFB5O43674 189 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 EIF4E2O60573 245 aaKnown RBP11.78□□□□□ -0.52
SMAD3-207ENST00000558763 RAB36O95755 333 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 LIMS3P0CW19 117 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 LIMS4P0CW20 117 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 PNMTP11086 282 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 BMP7P18075 431 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 F8A1P23610 371 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 HTR1FP30939 366 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 FOLR3P41439 243 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 FBXW4P57775 412 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 LSM3P62310 102 aaKnown RBP11.78□□□□□ -0.52
SMAD3-207ENST00000558763 DNASE1L3Q13609 305 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 CXXC5Q7LFL8 322 aaKnown RBP11.78□□□□□ -0.52
SMAD3-207ENST00000558763 SHFQ7M4L6 423 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 SLC43A2Q8N370 569 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 OR2Y1Q8NGV0 311 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 THAP3Q8WTV1 239 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-207ENST00000558763 LIPHQ8WWY8 451 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 PTP4A1Q93096 173 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 IFT27Q9BW83 186 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 MED20Q9H944 212 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 C12orf10Q9HB07 376 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 SLC24A3Q9HC58 644 aa11.78□□□□□ -0.52
SMAD3-207ENST00000558763 ZBTB20Q9HC78 741 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms