RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 MED20Q9H944 212 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 PRKAB1Q9Y478 270 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 ETV7Q9Y603 341 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 UNC119BA6NIH7 251 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 FGF16O43320 207 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 C1orf105O95561 183 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 ZGLP1P0C6A0 271 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 PRF1P14222 555 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 ABOP16442 354 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 SYN1P17600 705 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 TRHRP34981 398 aaPredicted RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 BSGP35613 385 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 OR1G1P47890 313 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 LUMP51884 338 aaPredicted RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 RPS11P62280 158 aaKnown RBP eCLIP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 CXADRP78310 365 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 TLE2Q04725 743 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 HABP2Q14520 560 aaPredicted RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 GLT8D1Q68CQ7 371 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 RPL13AP3Q6NVV1 102 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 FAAP20Q6NZ36 180 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 GLB1LQ6UWU2 654 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 GAREM2Q75VX8 874 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 FCRLAQ7L513 359 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 GDF7Q7Z4P5 450 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 SAMD14Q8IZD0 417 aaPredicted RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 RNF113BQ8IZP6 322 aaKnown RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 OR1J4Q8NGS1 313 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 SFXN5Q8TD22 340 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 ZFPM2Q8WW38 1151 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 SMPDL3BQ92485 455 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 SLC25A28Q96A46 364 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 EXOSC8Q96B26 276 aaKnown RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 SGK3Q96BR1 496 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 KLF16Q9BXK1 252 aaPredicted RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 EGLN1Q9GZT9 426 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 OR52D1Q9H346 318 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 TMEM138Q9NPI0 162 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 CMC2Q9NRP2 79 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 ZCCHC3Q9NUD5 404 aaKnown RBP10.36□□□□□ -0.75
PCAT29-201ENST00000558411 TNFSF18Q9UNG2 199 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 PLXNA2O75051 1894 aa10.36□□□□□ -0.75
PCAT29-201ENST00000558411 A0A1W2PPK0 400 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 ACOD1A6NK06 481 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 TMEM88BA6NKF7 163 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 OR2AG2A6NM03 316 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 TSPAN6O43657 245 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 GPRIN2O60269 458 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SLC25A12O75746 678 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 FBP1P09467 338 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 CLTBP09497 229 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 CSF1P09603 554 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 IRF1P10914 325 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 EPCAMP16422 314 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SRMP19623 302 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SLC2A5P22732 501 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 TAS2R20P59543 309 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 STXBP1P61764 594 aaKnown RBP10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SNRPEP62304 92 aaKnown RBP10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SNRPD1P62314 119 aaKnown RBP10.35□□□□□ -0.75
PCAT29-201ENST00000558411 ACTA2P62736 377 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 ACTG2P63267 376 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 KHDRBS2Q5VWX1 349 aaKnown RBP10.35□□□□□ -0.75
PCAT29-201ENST00000558411 PWWP2BQ6NUJ5 590 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 LPCAT3Q6P1A2 487 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 RPL22L1Q6P5R6 122 aaKnown RBP10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SERINC5Q86VE9 423 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 GLB1L2Q8IW92 636 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SYNPRQ8TBG9 265 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 PXYLP1Q8TE99 480 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SLC39A7Q92504 469 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 MIB2Q96AX9 1013 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SLC41A3Q96GZ6 507 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 HCAR1Q9BXC0 346 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 SUV39H2Q9H5I1 410 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 TMEM185BQ9H7F4 350 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 TCF7L1Q9HCS4 588 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 APMAPQ9HDC9 416 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 C14orf105Q9NVL8 296 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 ANKRD10Q9NXR5 420 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 KLHL28Q9NXS3 571 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 CALML5Q9NZT1 146 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 MIOXQ9UGB7 285 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 IRAK3Q9Y616 596 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 CASP8AP2Q9UKL3 1982 aa10.35□□□□□ -0.75
PCAT29-201ENST00000558411 H7BY64 318 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 H7C417 338 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 CDC42EP2O14613 210 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 PIP5K1CO60331 668 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 CTNSO60931 367 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 RBBP9O75884 186 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 AKR7A3O95154 331 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 NTN1O95631 604 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 RLN1P04808 185 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 MELTFP08582 738 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 PTAFRP25105 342 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 PDHA2P29803 388 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 PRLHRP49683 370 aa10.34□□□□□ -0.75
PCAT29-201ENST00000558411 MEF2AQ02078 507 aaPredicted RBP10.34□□□□□ -0.75
PCAT29-201ENST00000558411 SMCO1Q147U7 214 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms