RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 HNRNPCL1O60812 293 aaKnown RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 PMS2P2O95744 297 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 BCHEP06276 602 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 FESP07332 822 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 THBS1P07996 1170 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 GKN3PP0CG01 181 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 HNRNPCL4P0DMR1 293 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 PPP3CBP16298 524 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 CD53P19397 219 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 CCNA2P20248 432 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 FKBP2P26885 142 aaKnown RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 TACR3P29371 465 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 SLC1A3P43003 542 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 HTR3AP46098 478 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 OR3A2P47893 321 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 CLK1P49759 484 aaKnown RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 POLR2HP52434 150 aaKnown RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 CRISP3P54108 245 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 CSNK2A1P68400 391 aaPredicted RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 H3F3AP84243 136 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 FADDQ13158 208 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 SQLEQ14534 574 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 AGKQ53H12 422 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 RPS26P11Q5JNZ5 115 aaPredicted RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 ABLIM2Q6H8Q1 611 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 CXorf67Q86X51 503 aaPredicted RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 ZNF440Q8IYI8 595 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 C10orf111Q8N326 155 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 STON2Q8WXE9 905 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 MAL2Q969L2 176 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 DNAJA3Q96EY1 480 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 PIK3IP1Q96FE7 263 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 THOC1Q96FV9 657 aaKnown RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 ZNF300Q96RE9 604 aaPredicted RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 TACO1Q9BSH4 297 aaKnown RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 ACTR6Q9GZN1 396 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 OR10A4Q9H209 315 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 ZNF385DQ9H6B1 395 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 BCL2L10Q9HD36 194 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 A4GALTQ9NPC4 353 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 FANCFQ9NPI8 374 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 TMEM45AQ9NWC5 275 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 THUMPD1Q9NXG2 353 aaKnown RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 VAPAQ9P0L0 249 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 PRDM4Q9UKN5 801 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 TRAPPC4Q9Y296 219 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 ZNF443Q9Y2A4 671 aaPredicted RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 SPIN1Q9Y657 262 aaPredicted RBP7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 GMEB1Q9Y692 573 aa7.79□□□□□ -1.16
SNRPA1-206ENST00000558059 NAV3Q8IVL0 2385 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 TLN2Q9Y4G6 2542 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 ZANQ9Y493 2812 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 ZC3H12DA2A288 527 aaKnown RBP7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 FAM181BA6NEQ2 426 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 ZNF716A6NP11 495 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 NR5A2O00482 541 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 ZNF208O43345 1280 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 DNPH1O43598 174 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 EDF1O60869 148 aaKnown RBP7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 RAMP1O60894 148 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 PGM3O95394 542 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 ADAP00813 363 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 ARAFP10398 606 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 IMPDH2P12268 514 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 PRG2P13727 222 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 NTF4P34130 210 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 MAP2K6P52564 334 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 OR2B6P58173 313 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 IRX1P78414 480 aaPredicted RBP7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 KEAP1Q14145 624 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 LARS2Q15031 903 aaKnown RBP7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 PDK3Q15120 406 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 TSC22D1Q15714 1073 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 ZSWIM7Q19AV6 140 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 DEFB113Q30KQ7 82 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 LIN52Q52LA3 116 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 BEX5Q5H9J7 111 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 SFRP5Q5T4F7 317 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 RNF220Q5VTB9 566 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 PRAMEF8Q5VWM4 474 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 PRAMEF7Q5VXH5 474 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 DLEU7Q6UYE1 221 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 Q6ZT83 130 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 GALNT5Q7Z7M9 940 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 CCDC103Q8IW40 242 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 STEAP2Q8NFT2 490 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 ALPK1Q96QP1 1244 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 SPATA9Q9BWV2 254 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 HDHD5Q9BXW7 423 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 RAD21L1Q9H4I0 556 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 IKZF5Q9H5V7 419 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 TMEM181Q9P2C4 612 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 PRSS50Q9UI38 385 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 ZNF232Q9UNY5 417 aa7.78□□□□□ -1.16
SNRPA1-206ENST00000558059 CSPG4Q6UVK1 2322 aa7.77□□□□□ -1.17
SNRPA1-206ENST00000558059 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.77□□□□□ -1.17
SNRPA1-206ENST00000558059 A0A1W2PP18 115 aa7.77□□□□□ -1.17
SNRPA1-206ENST00000558059 TMEM247A6NEH6 219 aa7.77□□□□□ -1.17
SNRPA1-206ENST00000558059 PLAUP00749 431 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms