RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, human

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH11-211	ENST00000557726	DDIT4L	Q96D03	193 aa		11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	ZG16B	Q96DA0	208 aa		11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	NEURL3	Q96EH8	262 aa		11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	NAA11	Q9BSU3	229 aa	Predicted RBP	11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	SAP130	Q9H0E3	1048 aa		11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	EXOSC3	Q9NQT5	275 aa	Known RBP	11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	PARPBP	Q9NWS1	579 aa		11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	MALT1	Q9UDY8	824 aa		11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	RAP2C	Q9Y3L5	183 aa		11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	ATP23	Q9Y6H3	246 aa		11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	ATR	Q13535	2644 aa		11.24	□□□□□ -0.61
RDH11-211	ENST00000557726	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	GOLGA8Q	A0A0J9YX86	632 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	GOLGA8O	A6NCC3	632 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	GOLGA8N	F8WBI6	632 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	GPRIN2	O60269	458 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	EIF1B	O60739	113 aa	Known RBP	11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	SCN2B	O60939	215 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	LBP	P18428	481 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	S100A3	P33764	101 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	NTF4	P34130	210 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	RPL14	P50914	215 aa	Known RBP	11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	ANXA11	P50995	505 aa	Known RBP	11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	POLR2H	P52434	150 aa	Known RBP	11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	SLC16A1	P53985	500 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	FOXG1	P55316	489 aa	Predicted RBP	11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	NME5	P56597	212 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	SLC35A1	P78382	337 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	TGFBR3	Q03167	851 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	FUT5	Q11128	374 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	CASP8	Q14790	479 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	GABRA6	Q16445	453 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	DPY19L1	Q2PZI1	675 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	KRT71	Q3SY84	523 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	FAM174B	Q3ZCQ3	159 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	SPANXN4	Q5MJ08	99 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	C11orf71	Q6IPW1	123 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	RNF130	Q86XS8	419 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	TRIML2	Q8N7C3	387 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	CNOT9	Q92600	299 aa	Known RBP	11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	PMM1	Q92871	262 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	MUS81	Q96NY9	551 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	INPP5K	Q9BT40	448 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	FKRP	Q9H9S5	495 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	TRAPPC4	Q9Y296	219 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	SLC9A8	Q9Y2E8	581 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	TMED7	Q9Y3B3	224 aa		11.23	□□□□□ -0.61
RDH11-211	ENST00000557726	TMEM72	A0PK05	275 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726		E9PBE3	544 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	HMGN4	O00479	90 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	AP3D1	O14617	1153 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	BIRC5	O15392	142 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	ITGA5	P08648	1049 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	BMP4	P12644	408 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	UQCRB	P14927	111 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	IL7R	P16871	459 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	TACR3	P29371	465 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	SLC1A6	P48664	564 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	CHRNB3	Q05901	458 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	GNA13	Q14344	377 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	SYPL1	Q16563	259 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	ZNF544	Q6NX49	715 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	KLHL24	Q6TFL4	600 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	B3GLCT	Q6Y288	498 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	CMIP	Q8IY22	773 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	KIRREL3	Q8IZU9	778 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	ANKFN1	Q8N957	763 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	WDR60	Q8WVS4	1066 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	FAM168A	Q92567	244 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	TRNT1	Q96Q11	434 aa	Known RBP	11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	TNFRSF13C	Q96RJ3	184 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	NUF2	Q9BZD4	464 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	DCTN4	Q9UJW0	460 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	OSGIN1	Q9UJX0	560 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	AMDHD2	Q9Y303	409 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	FLVCR1	Q9Y5Y0	555 aa		11.22	□□□□□ -0.61
RDH11-211	ENST00000557726	PRAMEF27	A3QJZ7	478 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	CFAP73	A6NFT4	308 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	CCDC154	A6NI56	674 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	AGAP5	A6NIR3	686 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	RGS16	O15492	202 aa	Predicted RBP	11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	ZNF208	O43345	1280 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	SNUPN	O95149	360 aa	Known RBP	11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	NR2F1	P10589	423 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	IMPDH2	P12268	514 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	SLC25A16	P16260	332 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	CDH2	P19022	906 aa	Predicted RBP	11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	SLC1A3	P43003	542 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	TMEM249	Q2WGJ8	235 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	TSPO2	Q5TGU0	170 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	ZNF621	Q6ZSS3	439 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	ZNF525	Q8N782	197 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	WDR31	Q8NA23	367 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	OR10H5	Q8NGA6	315 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	AEN	Q8WTP8	325 aa	Known RBP	11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	TMEM158	Q8WZ71	300 aa		11.21	□□□□□ -0.61
RDH11-211	ENST00000557726	CCDC115	Q96NT0	180 aa		11.21	□□□□□ -0.61

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