RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 MS4A3Q96HJ5 214 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 NMNAT3Q96T66 252 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 MTIF3Q9H2K0 278 aaKnown RBP16.29■□□□□ 0.2
XRCC3-218ENST00000557439 SLA2Q9H6Q3 261 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 FOLH1BQ9HBA9 442 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 CACNG2Q9Y698 323 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 C2orf74A8MZ97 194 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 NKX2-2O95096 273 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 S1PR1P21453 382 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 ERP29P30040 261 aaKnown RBP16.29■□□□□ 0.2
XRCC3-218ENST00000557439 ATP12AP54707 1039 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 BTG2P78543 158 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 ILF3Q12906 894 aaKnown RBP eCLIP16.29■□□□□ 0.2
XRCC3-218ENST00000557439 SHHQ15465 462 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 SLC36A2Q495M3 483 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 NPSR1Q6W5P4 371 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 RTL4Q6ZR62 310 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 PXKQ7Z7A4 578 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 THAP4Q8WY91 577 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 AKAP1Q92667 903 aaKnown RBP eCLIP16.29■□□□□ 0.2
XRCC3-218ENST00000557439 SNAPC3Q92966 411 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 RASD2Q96D21 266 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 NKX2-4Q9H2Z4 354 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 BRD7Q9NPI1 651 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 GNG8Q9UK08 70 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 TMEM5Q9Y2B1 443 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 A0A1B0GVT2 93 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 C1QBP02746 253 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 GALP22466 123 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 GDI2P50395 445 aaKnown RBP16.28■□□□□ 0.2
XRCC3-218ENST00000557439 RCBTB1Q8NDN9 531 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 DERL3Q96Q80 235 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 GSDMCQ9BYG8 508 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 SLC25A18Q9H1K4 315 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 ING3Q9NXR8 418 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 H3BSH0 61 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 FABP7O15540 132 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 OR2B3O76000 313 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 APBB3O95704 486 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 PTBP1P26599 531 aaKnown RBP eCLIP16.28■□□□□ 0.2
XRCC3-218ENST00000557439 GIFP27352 417 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 RBMS1P29558 406 aaKnown RBP16.28■□□□□ 0.2
XRCC3-218ENST00000557439 RPL4P36578 427 aaKnown RBP16.28■□□□□ 0.2
XRCC3-218ENST00000557439 ZNF267Q14586 743 aaPredicted RBP16.28■□□□□ 0.2
XRCC3-218ENST00000557439 PRR23CQ6ZRP0 262 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 SIAH3Q8IW03 269 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 GPALPP1Q8IXQ4 340 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 OR6K6Q8NGW6 343 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 OR4C3Q8NH37 302 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 RPLP0P6Q8NHW5 317 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 AUNIPQ9H7T9 357 aa16.28■□□□□ 0.2
XRCC3-218ENST00000557439 A0A0J9YY10 115 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 FMO6PO60774 539 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 SLC6A6P31641 620 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 RPL13AP3Q6NVV1 102 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 RNF44Q7L0R7 432 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 HMGB4Q8WW32 186 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 CREB3L1Q96BA8 519 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 TSSK2Q96PF2 358 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 CITED4Q96RK1 184 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 DZANK1Q9NVP4 752 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 CHRNA9Q9UGM1 479 aa16.27■□□□□ 0.2
XRCC3-218ENST00000557439 ANKRD61A6NGH8 418 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 PRR32B1ATL7 298 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 GMFGO60234 142 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 ANKRD34CP0C6C1 535 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 NRG3P56975 720 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 ERVK-25P63136 954 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 MAB21L1Q13394 359 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 CEP78Q5JTW2 689 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 OR11H7Q8NGC8 314 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 YIPF5Q969M3 257 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 RELTQ969Z4 430 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 ZNF426Q9BUY5 554 aa16.27■□□□□ 0.19
XRCC3-218ENST00000557439 TCRBV21S2A2A0A5A6 115 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 ACOD1A6NK06 481 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 MT-ND4P03905 459 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 CXCL3P19876 107 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 MAOAP21397 527 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 CLDN12P56749 244 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 RPS11P62280 158 aaKnown RBP eCLIP16.26■□□□□ 0.19
XRCC3-218ENST00000557439 CCDC58Q4VC31 144 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 TAF8Q7Z7C8 310 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 PARGQ86W56 976 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 RIT1Q92963 219 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 ZNF222Q9UK12 451 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 TRBV2A0A0J9YWF9 115 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 OR6C68A6NDL8 312 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 CENPBD1B2RD01 187 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 EDNRAP25101 427 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 MRPL28Q13084 256 aaKnown RBP16.26■□□□□ 0.19
XRCC3-218ENST00000557439 HES5Q5TA89 166 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 STPG1Q5TH74 334 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 OTPQ5XKR4 325 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 UBE2Q1Q7Z7E8 422 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 SERPINA12Q8IW75 414 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 SNX33Q8WV41 574 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 KLHDC3Q9BQ90 382 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 INPP5EQ9NRR6 644 aa16.26■□□□□ 0.19
XRCC3-218ENST00000557439 SDK1Q7Z5N4 2213 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms