RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TMEM181Q9P2C4 612 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 KLHL13Q9P2N7 655 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 TESQ9UGI8 421 aaKnown RBP11.15□□□□□ -0.62
SLIRP-209ENST00000557342 CLEC4AQ9UMR7 237 aa11.15□□□□□ -0.62
SLIRP-209ENST00000557342 IGHV3-15A0A0B4J1V0 119 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 A8MVM7 634 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 AIM2O14862 343 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 SMAD9O15198 467 aaKnown RBP11.14□□□□□ -0.63
SLIRP-209ENST00000557342 FRS3O43559 492 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 TPST1O60507 370 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 EIF1BO60739 113 aaKnown RBP11.14□□□□□ -0.63
SLIRP-209ENST00000557342 FESP07332 822 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 YES1P07947 543 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 POU2F1P14859 743 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 PRDX6P30041 224 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 AGTR1P30556 359 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 CD79BP40259 229 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 RGS8P57771 180 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-209ENST00000557342 OR2B6P58173 313 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 SLC35A1P78382 337 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 DMTNQ08495 405 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 RASGEF1BQ0VAM2 473 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 VEZF1Q14119 521 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 CCDC80Q76M96 950 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 RANBP3LQ86VV4 465 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF295-AS1Q8N0V1 137 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 LSMEM1Q8N8F7 131 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 OR52E4Q8NGH9 312 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 FAM222BQ8WU58 562 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 DNAJA4Q8WW22 397 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-209ENST00000557342 HOPXQ9BPY8 73 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-209ENST00000557342 NAA11Q9BSU3 229 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-209ENST00000557342 OR11A1Q9GZK7 315 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 MYLK2Q9H1R3 596 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 OPN3Q9H1Y3 402 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-209ENST00000557342 PIF1Q9H611 641 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 BCO1Q9HAY6 547 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 SELENONQ9NZV5 590 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 ARL2BPQ9Y2Y0 163 aa11.14□□□□□ -0.63
SLIRP-209ENST00000557342 ELOA3DA6NLF2 546 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF724A8MTY0 619 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 FAM220BPB1ANY3 271 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 NDUFAB1O14561 156 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 LGI1O95970 557 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 IFNA14P01570 189 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 GPIP06744 558 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 PNMTP11086 282 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 PRF1P14222 555 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 IDUAP35475 653 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 KCNJ5P48544 419 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 CBX1P83916 185 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 TLE4Q04727 773 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 PDK3Q15120 406 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 ELOA3BQ3SY89 546 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 GLIPR1L2Q4G1C9 344 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 FAM91A1Q658Y4 838 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF474Q6S9Z5 364 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-209ENST00000557342 C5orf46Q6UWT4 87 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 HACD2Q6Y1H2 254 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 BEND4Q6ZU67 534 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 PIGWQ7Z7B1 504 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 ATG4DQ86TL0 474 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-209ENST00000557342 TREML1Q86YW5 311 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 TUSC5Q8IXB3 177 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF610Q8N9Z0 462 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 SMYD1Q8NB12 490 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 ELOA3Q8NG57 546 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 PIGXQ8TBF5 258 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 STK35Q8TDR2 534 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 C3orf49Q96BT1 292 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF583Q96ND8 569 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 PSD2Q9BQI7 771 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 TAPBPLQ9BX59 468 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 TMEM27Q9HBJ8 222 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 MCCC2Q9HCC0 563 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 EMC3Q9P0I2 261 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 NDRG3Q9UGV2 375 aa11.13□□□□□ -0.63
SLIRP-209ENST00000557342 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 NAV2Q8IVL1 2488 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 ZC3H12DA2A288 527 aaKnown RBP11.12□□□□□ -0.63
SLIRP-209ENST00000557342 GCM2O75603 506 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-209ENST00000557342 DCTN3O75935 186 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 GOSR1O95249 250 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 OPN1SWP03999 348 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 EPXP11678 715 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 IMPDH2P12268 514 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 FPR1P21462 350 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 NUDT2P50583 147 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 HOXC5Q00444 222 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 SNTB1Q13884 538 aaKnown RBP11.12□□□□□ -0.63
SLIRP-209ENST00000557342 DUSP7Q16829 419 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 ALG10BQ5I7T1 473 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 ABLIM2Q6H8Q1 611 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 ULK3Q6PHR2 472 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 PAQR6Q6TCH4 344 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 C6orf89Q6UWU4 347 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 COMTD1Q86VU5 262 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 OR2T12Q8NG77 320 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 SLC47A1Q96FL8 570 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 DACH2Q96NX9 599 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms