RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 OR52N5Q8NH56 324 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 DDIT4LQ96D03 193 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 DNAJA3Q96EY1 480 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 MUS81Q96NY9 551 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 OR52E6Q96RD3 313 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 PANX1Q96RD7 426 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 MDFIQ99750 246 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 PARD6BQ9BYG5 372 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 SLC38A1Q9H2H9 487 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 CENPHQ9H3R5 247 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 BARX1Q9HBU1 254 aaPredicted RBP14□□□□□ -0.17
TUBB3-213ENST00000557262 NOL12Q9UGY1 213 aaKnown RBP eCLIP14□□□□□ -0.17
TUBB3-213ENST00000557262 TMED7Q9Y3B3 224 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 V9GYY5 206 aaPredicted RBP14□□□□□ -0.17
TUBB3-213ENST00000557262 ZNF208O43345 1280 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 EIF1BO60739 113 aaKnown RBP13.99□□□□□ -0.17
TUBB3-213ENST00000557262 NDUFS7O75251 213 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 PGRP06401 933 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 ALDOCP09972 364 aaKnown RBP13.99□□□□□ -0.17
TUBB3-213ENST00000557262 POLR2HP52434 150 aaKnown RBP13.99□□□□□ -0.17
TUBB3-213ENST00000557262 CDH11P55287 796 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 NME5P56597 212 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 SLC35A1P78382 337 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 PLAURQ03405 335 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 LRRC74AQ0VAA2 488 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 BST1Q10588 318 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 GNA13Q14344 377 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 OR7E24Q6IFN5 339 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 KLHL17Q6TDP4 642 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 DNM1P46Q6ZS02 220 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 PIAS4Q8N2W9 510 aaPredicted RBP13.99□□□□□ -0.17
TUBB3-213ENST00000557262 HS6ST2Q96MM7 605 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 PAIP2Q9BPZ3 127 aaKnown RBP13.99□□□□□ -0.17
TUBB3-213ENST00000557262 NAA11Q9BSU3 229 aaPredicted RBP13.99□□□□□ -0.17
TUBB3-213ENST00000557262 INPP5KQ9BT40 448 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 AIG1Q9NVV5 245 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 PARPBPQ9NWS1 579 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 TAS2R16Q9NYV7 291 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 OSGIN1Q9UJX0 560 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 GDF2Q9UK05 429 aaPredicted RBP13.99□□□□□ -0.17
TUBB3-213ENST00000557262 ADAM21Q9UKJ8 722 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 B3GALT5Q9Y2C3 310 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 SLC25A15Q9Y619 301 aa13.99□□□□□ -0.17
TUBB3-213ENST00000557262 TMEM72A0PK05 275 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 FAAHO00519 579 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 SDHDO14521 159 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 AP3D1O14617 1153 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 CHRM4P08173 479 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 NR2F1P10589 423 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 IMPDH2P12268 514 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 IL7RP16871 459 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 PTNP21246 168 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 TACR3P29371 465 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 IL12AP29459 219 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 SLC1A3P43003 542 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 ZNF83P51522 516 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 DMTNQ08495 405 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 GABRA6Q16445 453 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 NRF1Q16656 503 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 CEP85LQ5SZL2 805 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 SLC22A25Q6T423 547 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 CROCCP2Q86T23 111 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 DEPDC4Q8N2C3 294 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 WDR60Q8WVS4 1066 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 DHRS9Q9BPW9 319 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 MALT1Q9UDY8 824 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 PRDM4Q9UKN5 801 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 GPR45Q9Y5Y3 372 aa13.98□□□□□ -0.17
TUBB3-213ENST00000557262 A0A1W2PR80 420 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 CFAP73A6NFT4 308 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 E7EQL1 145 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 KRT75O95678 551 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 TP53P04637 393 aaPredicted RBP13.97□□□□□ -0.17
TUBB3-213ENST00000557262 GSNP06396 782 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 DBIP07108 87 aaKnown RBP13.97□□□□□ -0.17
TUBB3-213ENST00000557262 RPS4Y1P22090 263 aaKnown RBP13.97□□□□□ -0.17
TUBB3-213ENST00000557262 CD40P25942 277 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 TTKP33981 857 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 CDKN2CP42773 168 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 FOXG1P55316 489 aaPredicted RBP13.97□□□□□ -0.17
TUBB3-213ENST00000557262 GSTA3Q16772 222 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 HHATQ5VTY9 493 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 GLB1L3Q8NCI6 653 aaPredicted RBP13.97□□□□□ -0.17
TUBB3-213ENST00000557262 OR52E4Q8NGH9 312 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 ADAD1Q96M93 576 aaKnown RBP13.97□□□□□ -0.17
TUBB3-213ENST00000557262 ZBTB18Q99592 522 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 RHNO1Q9BSD3 238 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 ADAM19Q9H013 955 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 WDR55Q9H6Y2 383 aaPredicted RBP13.97□□□□□ -0.17
TUBB3-213ENST00000557262 CBLN4Q9NTU7 201 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 UPB1Q9UBR1 384 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 POU2F3Q9UKI9 436 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 SLC9A8Q9Y2E8 581 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 FLVCR1Q9Y5Y0 555 aa13.97□□□□□ -0.17
TUBB3-213ENST00000557262 ANK3Q12955 4377 aaKnown RBP13.97□□□□□ -0.17
TUBB3-213ENST00000557262 TRPC5OSA6NMA1 111 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 PDLIM1O00151 329 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 HDAC3O15379 428 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 TLX2O43763 284 aaPredicted RBP13.96□□□□□ -0.17
TUBB3-213ENST00000557262 SSX4O60224 188 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms