RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SIRPAP78324 504 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 DYRK1AQ13627 763 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 CDK5R1Q15078 307 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 ZNF425Q6IV72 752 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 APOOLQ6UXV4 268 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 FCRLAQ7L513 359 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 CMIPQ8IY22 773 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 SNX33Q8WV41 574 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 CNOT9Q92600 299 aaKnown RBP10.5□□□□□ -0.73
SRP54-213ENST00000556994 RAB7BQ96AH8 199 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 SMIM19Q96E16 107 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 CAPNS2Q96L46 248 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 GFI1Q99684 422 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 GSX2Q9BZM3 304 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 ANKRD10Q9NXR5 420 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 FLRT3Q9NZU0 649 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 HCN3Q9P1Z3 774 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 CHD9Q3L8U1 2897 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 ANKRD61A6NGH8 418 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 TSPAN4O14817 238 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 KHNYNO15037 678 aaKnown RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 OGG1O15527 345 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 ARL6IP5O75915 188 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 SERPINA3P01011 423 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 UCHL1P09936 223 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 CPMP14384 443 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 SRMP19623 302 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 PSMB1P20618 241 aaKnown RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 GBX2P52951 348 aaPredicted RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 OPCMLQ14982 345 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 GXYLT1Q4G148 440 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 HSD17B12Q53GQ0 312 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 ZNF296Q8WUU4 475 aaPredicted RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 GAL3ST3Q96A11 431 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 GPR174Q9BXC1 333 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 RAB11FIP5Q9BXF6 653 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 ACTR6Q9GZN1 396 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 FKRPQ9H9S5 495 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 MCCC2Q9HCC0 563 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 PHPT1Q9NRX4 125 aaPredicted RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 NTMQ9P121 344 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 MGAT4CQ9UBM8 478 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 ADAM18Q9Y3Q7 739 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 FAM171A2A8MVW0 826 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 TEX46H3BTG2 121 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 PIN1P1O15428 100 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 GSTZ1O43708 216 aaPredicted RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 SELENOFO60613 162 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 KHDRBS3O75525 346 aaKnown RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 ATF4P18848 351 aaPredicted RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 CXCL2P19875 107 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 ANXA7P20073 488 aaKnown RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 POU3F2P20265 443 aaPredicted RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 GABRA3P34903 492 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 PTGS2P35354 604 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 RAG2P55895 527 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 RPS15P62841 145 aaKnown RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 IKZF1Q13422 519 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 FHL1Q13642 323 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 UBE2NLQ5JXB2 153 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 RPL13AP3Q6NVV1 102 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 FBXO42Q6P3S6 717 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 FAM199XQ6PEV8 388 aaPredicted RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 PRSS41Q7RTY9 318 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 LCN9Q8WX39 176 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 RBPMSQ93062 196 aaKnown RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 ELMOD3Q96FG2 381 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 SFXN2Q96NB2 322 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 TOX2Q96NM4 488 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 C7orf50Q9BRJ6 194 aaKnown RBP10.49□□□□□ -0.73
SRP54-213ENST00000556994 ZCCHC4Q9H5U6 513 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 NRIP3Q9NQ35 241 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 ZNF69Q9UC07 566 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 COPS3Q9UNS2 423 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 IER3IP1Q9Y5U9 82 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 RNF215Q9Y6U7 377 aa10.49□□□□□ -0.73
SRP54-213ENST00000556994 A0A1B0GWA3 101 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 POM121CA8CG34 1229 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 SERPINI2O75830 405 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 ATP1B1P05026 303 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 RPS4Y1P22090 263 aaKnown RBP10.48□□□□□ -0.73
SRP54-213ENST00000556994 TSFMP43897 325 aaKnown RBP10.48□□□□□ -0.73
SRP54-213ENST00000556994 MNX1P50219 401 aaPredicted RBP10.48□□□□□ -0.73
SRP54-213ENST00000556994 ACTC1P68032 377 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 ACTA1P68133 377 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 FAM78AQ5JUQ0 283 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 SFRP5Q5T4F7 317 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 PAQR7Q86WK9 346 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 SLITRK4Q8IW52 837 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 TMEM52Q8NDY8 209 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 ZPLD1Q8TCW7 415 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 SMARCD2Q92925 531 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 SARGQ9BW04 601 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 TMEM27Q9HBJ8 222 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 NOX3Q9HBY0 568 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 C2orf42Q9NWW7 574 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 HAO2Q9NYQ3 351 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 POMT2Q9UKY4 750 aa10.48□□□□□ -0.73
SRP54-213ENST00000556994 MRPS2Q9Y399 296 aaKnown RBP10.48□□□□□ -0.73
SRP54-213ENST00000556994 NPTNQ9Y639 398 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms