RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 COMTD1Q86VU5 262 aa20.12■□□□□ 0.81
PABPN1-207ENST00000556821 KLHL4Q9C0H6 718 aa20.12■□□□□ 0.81
PABPN1-207ENST00000556821 TMEM38AQ9H6F2 299 aa20.12■□□□□ 0.81
PABPN1-207ENST00000556821 MED4Q9NPJ6 270 aa20.12■□□□□ 0.81
PABPN1-207ENST00000556821 KLHL9Q9P2J3 617 aa20.12■□□□□ 0.81
PABPN1-207ENST00000556821 IFT52Q9Y366 437 aa20.12■□□□□ 0.81
PABPN1-207ENST00000556821 HDGFL3Q9Y3E1 203 aa20.12■□□□□ 0.81
PABPN1-207ENST00000556821 ZNF814B7Z6K7 855 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 C5orf58C9J3I9 102 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 ANGPT2O15123 496 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 ZNF208O43345 1280 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 FRS3O43559 492 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 YES1P07947 543 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 TROVE2P10155 538 aaKnown RBP eCLIP20.11■□□□□ 0.81
PABPN1-207ENST00000556821 RASGEF1BQ0VAM2 473 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 ZSWIM7Q19AV6 140 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 HSP90B2PQ58FF3 399 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 ANKRD34AQ69YU3 496 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 BEND4Q6ZU67 534 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 ANKRD27Q96NW4 1050 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 ZNF232Q9UNY5 417 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 CORO2BQ9UQ03 480 aa20.11■□□□□ 0.81
PABPN1-207ENST00000556821 ZNF716A6NP11 495 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 DEFB108AA8MXU0 73 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 FBP2O00757 339 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 GCM2O75603 506 aaPredicted RBP20.1■□□□□ 0.81
PABPN1-207ENST00000556821 IMPDH2P12268 514 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 EDNRAP25101 427 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 FKBP2P26885 142 aaKnown RBP20.1■□□□□ 0.81
PABPN1-207ENST00000556821 FOXD4Q12950 439 aaPredicted RBP20.1■□□□□ 0.81
PABPN1-207ENST00000556821 REEP3Q6NUK4 255 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 MTDHQ86UE4 582 aaKnown RBP20.1■□□□□ 0.81
PABPN1-207ENST00000556821 STK32CQ86UX6 486 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 GABRG1Q8N1C3 465 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 CADM2Q8N3J6 435 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 NINJ1Q92982 152 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 CGREF1Q99674 301 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 TACO1Q9BSH4 297 aaKnown RBP20.1■□□□□ 0.81
PABPN1-207ENST00000556821 MED18Q9BUE0 208 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 TMEM181Q9P2C4 612 aa20.1■□□□□ 0.81
PABPN1-207ENST00000556821 ZNF724A8MTY0 619 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 EVPLLA8MZ36 301 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 DNPH1O43598 174 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 RAMP1O60894 148 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 THBDP07204 575 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 VIMP08670 466 aaKnown RBP20.09■□□□□ 0.81
PABPN1-207ENST00000556821 CRYGSP22914 178 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 ARFIP2P53365 341 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 MTPNP58546 118 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 H3F3AP84243 136 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 SCARB2Q14108 478 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 WBP2NLQ6ICG8 309 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 PTOV1Q86YD1 416 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 ZC3HAV1LQ96H79 300 aaKnown RBP20.09■□□□□ 0.81
PABPN1-207ENST00000556821 PLEKHF2Q9H8W4 249 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 CACYBPQ9HB71 228 aaKnown RBP20.09■□□□□ 0.81
PABPN1-207ENST00000556821 C6orf203Q9P0P8 240 aaPredicted RBP20.09■□□□□ 0.81
PABPN1-207ENST00000556821 ROS1P08922 2347 aa20.09■□□□□ 0.81
PABPN1-207ENST00000556821 IGKV3D-15A0A087WSY6 115 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 TPST1O60507 370 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 PSMB1P20618 241 aaKnown RBP20.08■□□□□ 0.81
PABPN1-207ENST00000556821 PRKAR1BP31321 381 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 OR3A2P47893 321 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 MAP2K6P52564 334 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 HOXC5Q00444 222 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 NFYCQ13952 458 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 GLIPR1L2Q4G1C9 344 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 FBXW10Q5XX13 1052 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 NANOS1Q8WY41 292 aaKnown RBP20.08■□□□□ 0.81
PABPN1-207ENST00000556821 SLC35B4Q969S0 331 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 C3orf49Q96BT1 292 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 ZNF775Q96BV0 537 aaPredicted RBP20.08■□□□□ 0.81
PABPN1-207ENST00000556821 DDIT4LQ96D03 193 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 ARMC7Q9H6L4 198 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 SAR1AQ9NR31 198 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 CCM2LQ9NUG4 571 aaPredicted RBP20.08■□□□□ 0.81
PABPN1-207ENST00000556821 ZNF226Q9NYT6 803 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 PRSS50Q9UI38 385 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 ST6GALNAC2Q9UJ37 374 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 PRDM4Q9UKN5 801 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 TRAPPC4Q9Y296 219 aa20.08■□□□□ 0.81
PABPN1-207ENST00000556821 CADP27708 2225 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 CASKO14936 926 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 LOXP28300 417 aaPredicted RBP20.07■□□□□ 0.8
PABPN1-207ENST00000556821 AQP1P29972 269 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 MDH1P40925 334 aaKnown RBP20.07■□□□□ 0.8
PABPN1-207ENST00000556821 OR2B6P58173 313 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 BNIP2Q12982 314 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 KLF10Q13118 480 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 CAPRIN1Q14444 709 aaKnown RBP20.07■□□□□ 0.8
PABPN1-207ENST00000556821 PDK3Q15120 406 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 DHRS4L2Q6PKH6 230 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.07■□□□□ 0.8
PABPN1-207ENST00000556821 CXorf67Q86X51 503 aaPredicted RBP20.07■□□□□ 0.8
PABPN1-207ENST00000556821 CCDC103Q8IW40 242 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 ZHX1-C8orf76Q96EF9 292 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 ZNF317Q96PQ6 595 aaPredicted RBP20.07■□□□□ 0.8
PABPN1-207ENST00000556821 MDFIQ99750 246 aa20.07■□□□□ 0.8
PABPN1-207ENST00000556821 HEATR1Q9H583 2144 aaKnown RBP20.06■□□□□ 0.8
PABPN1-207ENST00000556821 TMEM229AB2RXF0 380 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms