RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 EPHA3P29320 983 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 NOS3P29474 1203 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 RYKP34925 604 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 SESN3P58005 492 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 UFM1P61960 85 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 PHC1P78364 1004 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 SKP2Q13309 424 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 CAPRIN1Q14444 709 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 P2RY6Q15077 328 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 SFRP5Q5T4F7 317 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 TYW3Q6IPR3 259 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 ZNF704Q6ZNC4 412 aaPredicted RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 TMPPEQ6ZT21 453 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 CCDC121Q6ZUS5 278 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 OLIG3Q7RTU3 272 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 NUFIP2Q7Z417 695 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 BIVMQ86UB2 503 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 CXorf67Q86X51 503 aaPredicted RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 ZNF100Q8IYN0 542 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 GLB1L3Q8NCI6 653 aaPredicted RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 WFDC11Q8NEX6 87 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 TMEM171Q8WVE6 324 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 KISS1RQ969F8 398 aaPredicted RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 PLPPR2Q96GM1 343 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 C18orf12Q96KH6 178 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 CCDC115Q96NT0 180 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 OR52E6Q96RD3 313 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 QRSL1Q9H0R6 528 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 ESRP2Q9H6T0 727 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 COQ10BQ9H8M1 238 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 CACYBPQ9HB71 228 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 EMC3Q9P0I2 261 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 CHRNA9Q9UGM1 479 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 KCNE5Q9UJ90 142 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 USH1CQ9Y6N9 552 aa6.84□□□□□ -1.31
HNRNPC-226ENST00000556628 PRRC2AP48634 2157 aaKnown RBP6.84□□□□□ -1.32
HNRNPC-226ENST00000556628 AKAP9Q99996 3911 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 HEATR5AQ86XA9 2040 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 TMEM247A6NEH6 219 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 CCT8L1PA6NM43 557 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 SDHDO14521 159 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 RFXANKO14593 260 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 GPR171O14626 319 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 KLF4O43474 513 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 CYTIPO60759 359 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 DNAJA2O60884 412 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 TMCC2O75069 709 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 SNNO75324 88 aaPredicted RBP6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 SLC22A3O75751 556 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 DCTN3O75935 186 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 H6PDO95479 791 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 ADAP00813 363 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 IL6P05231 212 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 THBDP07204 575 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 FESP07332 822 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 INHBBP09529 407 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 ALDOCP09972 364 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 NR2F1P10589 423 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 IDO1P14902 403 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 IL7RP16871 459 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 PGM1P36871 562 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 HTR3AP46098 478 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 CLK1P49759 484 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 DIO1P49895 249 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 KCNJ10P78508 379 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 CHRNEQ04844 493 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 ITGADQ13349 1161 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 MAPK14Q16539 360 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 GSTA3Q16772 222 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 SYT14P1Q58G82 188 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 Q5PR19 223 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 CGB2Q6NT52 195 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 TFAP2EQ6VUC0 442 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 FRRS1Q6ZNA5 592 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 LRRC74BQ6ZQY2 392 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 Q6ZT83 130 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 SSX8Q7RTT4 187 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 TRPM8Q7Z2W7 1104 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 GRINAQ7Z429 371 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 RNF130Q86XS8 419 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 CMIPQ8IY22 773 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 WDR60Q8WVS4 1066 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 HSD17B8Q92506 261 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 PMM1Q92871 262 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 S100PBPQ96BU1 408 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 DDIT4LQ96D03 193 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 PERPQ96FX8 193 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 MARK4Q96L34 752 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 TRNT1Q96Q11 434 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 PSD2Q9BQI7 771 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 BDH2Q9BUT1 245 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 POTEKPQ9BYX7 375 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 CXorf56Q9H5V9 222 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 WDR55Q9H6Y2 383 aaPredicted RBP6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 RMND5AQ9H871 391 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 BCO1Q9HAY6 547 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 SLCO1B3Q9NPD5 702 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 EXOSC3Q9NQT5 275 aaKnown RBP6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 CTPS2Q9NRF8 586 aa6.83□□□□□ -1.32
HNRNPC-226ENST00000556628 HDGFL3Q9Y3E1 203 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms