RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 AIG1Q9NVV5 245 aa4.22□□□□□ -1.73
ATXN3-238ENST00000556288 FLRT3Q9NZU0 649 aa4.22□□□□□ -1.73
ATXN3-238ENST00000556288 CCDC167Q9P0B6 97 aa4.22□□□□□ -1.73
ATXN3-238ENST00000556288 ERRFI1Q9UJM3 462 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-238ENST00000556288 TINAGQ9UJW2 476 aa4.22□□□□□ -1.73
ATXN3-238ENST00000556288 PCDHGB3Q9Y5G1 929 aa4.22□□□□□ -1.73
ATXN3-238ENST00000556288 LIPGQ9Y5X9 500 aa4.22□□□□□ -1.73
ATXN3-238ENST00000556288 CHCHD2Q9Y6H1 151 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-238ENST00000556288 KCNE3Q9Y6H6 103 aa4.22□□□□□ -1.73
ATXN3-238ENST00000556288 MYO18BQ8IUG5 2567 aa4.22□□□□□ -1.73
ATXN3-238ENST00000556288 RNF103-CHMP3A0A140T963 221 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ASPDHA6ND91 283 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TMEM247A6NEH6 219 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TTC36A6NLP5 189 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 DUXAA6NLW8 204 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ZAR1LA6NP61 321 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 LINC00473A8K010 186 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 C17orf51A8MQB3 221 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 H3BNH8 94 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 RFXANKO14593 260 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 MGST3O14880 152 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TSPAN2O60636 221 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TBX19O60806 448 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ZG16O60844 167 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 KCNK2O95069 426 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 NXPH3O95157 252 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TGDSO95455 350 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ANGPTL1O95841 491 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 IGKV1D-16P01601 117 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 IL6P05231 212 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 KRT16P08779 473 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 NR2F1P10589 423 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 DPP4P27487 766 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 IL12AP29459 219 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 EVI2BP34910 448 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 PTH2RP49190 550 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 CCR4P51679 360 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TDGF1P3P51864 188 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 SMSP52788 366 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 HPCAP84074 193 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 C17orf67Q0P5P2 114 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 PDE7AQ13946 482 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 CEBPEQ15744 281 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 SGCBQ16585 318 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 MMEL1Q495T6 779 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 CMPK2Q5EBM0 449 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF324BQ6AW86 544 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TIGD3Q6B0B8 471 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 HIST2H2BCQ6DN03 193 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TMEM211Q6ICI0 200 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 MFSD12Q6NUT3 480 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ARHGAP11AQ6P4F7 1023 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ZCCHC12Q6PEW1 402 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 NCCRP1Q6ZVX7 275 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TRILQ7L0X0 811 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 P4HA3Q7Z4N8 544 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 CPLX4Q7Z7G2 160 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 RNF130Q86XS8 419 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 PLCZ1Q86YW0 608 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 LRRC34Q8IZ02 419 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 SPARTQ8N0X7 666 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 EID3Q8N140 333 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 OR2L13Q8N349 312 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TRIML2Q8N7C3 387 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ZNF527Q8NB42 609 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 FAM83FQ8NEG4 500 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-238ENST00000556288 C17orf47Q8NEP4 570 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 OR9I1Q8NGQ6 314 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 OR4C3Q8NH37 302 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 FAM57AQ8TBR7 257 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TMEM171Q8WVE6 324 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 HGDQ93099 445 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ABTB1Q969K4 478 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-238ENST00000556288 SARAFQ96BY9 339 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 DTNBP1Q96EV8 351 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ITCHQ96J02 903 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 C7orf26Q96N11 449 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 BTBD9Q96Q07 612 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 SLX1AQ9BQ83 275 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 LMF2Q9BU23 707 aaKnown RBP4.21□□□□□ -1.74
ATXN3-238ENST00000556288 CCDC28BQ9BUN5 200 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TMEM120AQ9BXJ8 343 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 PRRG4Q9BZD6 226 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 PIGUQ9H490 435 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 RABEP2Q9H5N1 569 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 PTGES2Q9H7Z7 377 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 CACYBPQ9HB71 228 aaKnown RBP4.21□□□□□ -1.74
ATXN3-238ENST00000556288 PROK2Q9HC23 129 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 MED4Q9NPJ6 270 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 PNPLA3Q9NST1 481 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 SIRT3Q9NTG7 399 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-238ENST00000556288 EXD2Q9NVH0 621 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 FGFR1OP2Q9NVK5 253 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 FAM120CQ9NX05 1096 aaKnown RBP4.21□□□□□ -1.74
ATXN3-238ENST00000556288 ASIC5Q9NY37 505 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 TAS2R10Q9NYW0 307 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 COQ3Q9NZJ6 369 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 HAO1Q9UJM8 370 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 MKLN1Q9UL63 735 aa4.21□□□□□ -1.74
ATXN3-238ENST00000556288 VDAC3Q9Y277 283 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms