RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TMEM72A0PK05 275 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 ERICH4A6NGS2 130 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 CD8B2A6NJW9 211 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 hCG_2039718K7EN88 272 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 EFNA2O43921 213 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 TPST2O60704 377 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 EIF1BO60739 113 aaKnown RBP6.87□□□□□ -1.31
TDP1-214ENST00000556063 KRT36O76013 467 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 WISP2O76076 250 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 STSP08842 583 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 FCGR2AP12318 317 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 NQO1P15559 274 aaKnown RBP6.87□□□□□ -1.31
TDP1-214ENST00000556063 ACVR2AP27037 513 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 IDUAP35475 653 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 CA7P43166 264 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 YAP1P46937 504 aaKnown RBP6.87□□□□□ -1.31
TDP1-214ENST00000556063 PER3P56645 1201 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 CLDN15P56746 228 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 CLDN20P56880 219 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 CARD18P57730 90 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 NUP107P57740 925 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 RAC3P60763 192 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 SLC35A1P78382 337 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 MYBPHQ13203 477 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 GK3PQ14409 553 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 IGFBP7Q16270 282 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 C1orf185Q5T7R7 199 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 C1orf140Q5VVS0 124 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 GTF2IRD2BQ6EKJ0 949 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 B3GNT6Q6ZMB0 384 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 TMPPEQ6ZT21 453 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 P4HA3Q7Z4N8 544 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 GDF7Q7Z4P5 450 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 GTF2IRD2Q86UP8 949 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 CHERPQ8IWX8 916 aaKnown RBP6.87□□□□□ -1.31
TDP1-214ENST00000556063 ADGRG5Q8IZF4 528 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 RNF113BQ8IZP6 322 aaKnown RBP6.87□□□□□ -1.31
TDP1-214ENST00000556063 C10orf53Q8N6V4 93 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 FAM86B1Q8N7N1 296 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 OR6S1Q8NH40 331 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 OR10D3Q8NH80 312 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 CANT1Q8WVQ1 401 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 OSTF1Q92882 214 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 CPNE4Q96A23 557 aaPredicted RBP6.87□□□□□ -1.31
TDP1-214ENST00000556063 C7orf34Q96L11 122 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 NPAS1Q99742 590 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 TM9SF2Q99805 663 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 WFDC6Q9BQY6 131 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 NAA11Q9BSU3 229 aaPredicted RBP6.87□□□□□ -1.31
TDP1-214ENST00000556063 CHID1Q9BWS9 393 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 CALHM2Q9HA72 323 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 NMNAT1Q9HAN9 279 aaPredicted RBP6.87□□□□□ -1.31
TDP1-214ENST00000556063 PNPLA3Q9NST1 481 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 TNFRSF10DQ9UBN6 386 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 RALYQ9UKM9 306 aaKnown RBP6.87□□□□□ -1.31
TDP1-214ENST00000556063 TMCC3Q9ULS5 477 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 SLC7A7Q9UM01 511 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 A4GNTQ9UNA3 340 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 MED31Q9Y3C7 131 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 ZNF175Q9Y473 711 aa6.87□□□□□ -1.31
TDP1-214ENST00000556063 INTS1Q8N201 2190 aaKnown RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 PHF3Q92576 2039 aaKnown RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 TRAV36DV7A0A075B6V5 113 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 A0A1W2PNR3 127 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 A0A1W2PRQ8 180 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 SLC22A20A6NK97 555 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 CLCA1A8K7I4 914 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 E9PLN8 166 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 CCL21O00585 134 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 GNGT2O14610 69 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 TNFSF11O14788 317 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 CXCL13O43927 109 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 GADD45GO95257 159 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 PMS2P2O95744 297 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 MT-ATP6P00846 226 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 OPN1LWP04000 364 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 SEMG1P04279 462 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 HIST1H2ABP04908 130 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 FCGR1AP12314 374 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 IL11P20809 199 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 GNLYP22749 145 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 IFNGR2P38484 337 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 MAGEA2P43356 314 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 DIO1P49895 249 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 SUCLG1P53597 346 aaKnown RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 OR2B6P58173 313 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 ACTR3P61158 418 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 VLDLRP98155 873 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 SPIBQ01892 262 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 MRPL49Q13405 166 aaKnown RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 DGCR6Q14129 220 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 TAF11Q15544 211 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 C3AR1Q16581 482 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 EIF2S3LQ2VIR3 472 aaKnown RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 ACSF3Q4G176 576 aaPredicted RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 FGD3Q5JSP0 725 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 DCST1Q5T197 706 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 FAM69AQ5T7M9 428 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 EEF1A1P5Q5VTE0 462 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 NSUN5P2Q63ZY6 315 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms