RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 OR5W2Q8NH69 310 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 CLDND2Q8NHS1 167 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 PHOSPHO1Q8TCT1 267 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 NEU4Q8WWR8 484 aaPredicted RBP7.85□□□□□ -1.15
PRKCH-218ENST00000555628 TMEM237Q96Q45 408 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 OR5B2Q96R09 309 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 VRK1Q99986 396 aaPredicted RBP7.85□□□□□ -1.15
PRKCH-218ENST00000555628 MRPL57Q9BQC6 102 aaKnown RBP7.85□□□□□ -1.15
PRKCH-218ENST00000555628 ERP44Q9BS26 406 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 KATNB1Q9BVA0 655 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 BTBD2Q9BX70 525 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 VPS11Q9H270 941 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 MRPL46Q9H2W6 279 aaKnown RBP7.85□□□□□ -1.15
PRKCH-218ENST00000555628 MIEF1Q9NQG6 463 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 GIN1Q9NXP7 522 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 NFU1Q9UMS0 254 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 USP22Q9UPT9 525 aa7.85□□□□□ -1.15
PRKCH-218ENST00000555628 NOSIPQ9Y314 301 aaKnown RBP7.85□□□□□ -1.15
PRKCH-218ENST00000555628 DNAH3Q8TD57 4116 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 CENPVL1A0A0U1RR11 272 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 LYNX1G3V0Z9 82 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 CCDC188H7C350 402 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 DNPH1O43598 174 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 SMIM24O75264 130 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 URI1O94763 535 aaPredicted RBP7.84□□□□□ -1.15
PRKCH-218ENST00000555628 SNUPNO95149 360 aaKnown RBP7.84□□□□□ -1.15
PRKCH-218ENST00000555628 HSPA4LO95757 839 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 PF4P02776 101 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 MSMBP08118 114 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 LYNX1P0DP58 116 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 HKR1P10072 659 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 MAGEA4P43358 317 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 LMO4P61968 165 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 UBA52P62987 128 aaKnown RBP7.84□□□□□ -1.15
PRKCH-218ENST00000555628 NAAAQ02083 359 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 NKPD1Q17RQ9 610 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 TSNAXIP1Q2TAA8 658 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 C3orf36Q3SXR2 165 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 TIGD2Q4W5G0 525 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 HIKESHIQ53FT3 197 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 ELFN2Q5R3F8 820 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 ZNF678Q5SXM1 525 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 ANKRD26P1Q6NSI1 321 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 ZCCHC12Q6PEW1 402 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 UGT2A3Q6UWM9 527 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 SPATA19Q7Z5L4 167 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 UBE2J2Q8N2K1 259 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 MMGT1Q8N4V1 131 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 COX18Q8N8Q8 333 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 FAM71CQ8NEG0 241 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 NUP37Q8NFH4 326 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 TOR1AIP2Q8NFQ8 470 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 FAM76AQ8TAV0 307 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 METTL6Q8TCB7 284 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 FBXO25Q8TCJ0 367 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 CDS1Q92903 461 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 ARL5BQ96KC2 179 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 FCRL1Q96LA6 429 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 SLC38A2Q96QD8 506 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 STACQ99469 402 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 FUT8Q9BYC5 575 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 DPH5Q9H2P9 285 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 NELFAQ9H3P2 528 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 ZNF442Q9H7R0 627 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 KCNE5Q9UJ90 142 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 POLR3HQ9Y535 204 aaPredicted RBP7.84□□□□□ -1.15
PRKCH-218ENST00000555628 TIMM22Q9Y584 194 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 FLVCR1Q9Y5Y0 555 aa7.84□□□□□ -1.15
PRKCH-218ENST00000555628 LOC105371242A0A075B767 164 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 KRTAP9-6A0A140TA67 174 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 SULT2B1O00204 365 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 GPR171O14626 319 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 PDPK1O15530 556 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 EIF4E2O60573 245 aaKnown RBP7.83□□□□□ -1.16
PRKCH-218ENST00000555628 BCAS1O75363 584 aaPredicted RBP7.83□□□□□ -1.16
PRKCH-218ENST00000555628 PMS2P2O95744 297 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 ENO1P06733 434 aaKnown RBP7.83□□□□□ -1.16
PRKCH-218ENST00000555628 CECR9P0C854 216 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 HPGDP15428 266 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 CREB1P16220 341 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 MPGP29372 298 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 SESN3P58005 492 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 PRPS1P60891 318 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 CSNK2A1P68400 391 aaPredicted RBP7.83□□□□□ -1.16
PRKCH-218ENST00000555628 POU6F2P78424 691 aaPredicted RBP7.83□□□□□ -1.16
PRKCH-218ENST00000555628 BTKQ06187 659 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 SCGB2A2Q13296 93 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 SLC17A1Q14916 467 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 C9orf135Q5VTT2 229 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 AP1ARQ63HQ0 302 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 NOXRED1Q6NXP6 359 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 LRIG3Q6UXM1 1119 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 C1QL2Q7Z5L3 287 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 CCDC103Q8IW40 242 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 CDK20Q8IZL9 346 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 ZIC4Q8N9L1 334 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 CEP70Q8NHQ1 597 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 CDC26Q8NHZ8 85 aa7.83□□□□□ -1.16
PRKCH-218ENST00000555628 SLC25A43Q8WUT9 341 aaPredicted RBP7.83□□□□□ -1.16
PRKCH-218ENST00000555628 WDR60Q8WVS4 1066 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms