RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 PCDHB14Q9Y5E9 798 aa21.65■■□□□ 1.06
PRKCH-216ENST00000555542 C2CD3Q4AC94 2353 aa21.65■■□□□ 1.06
PRKCH-216ENST00000555542 DSPPQ9NZW4 1301 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 IGKV3D-15A0A087WSY6 115 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 CDHR4A6H8M9 788 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 NR5A2O00482 541 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 HS3ST1O14792 307 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 ZNF208O43345 1280 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 TFPTP0C1Z6 253 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 NCF2P19878 526 aaPredicted RBP21.64■■□□□ 1.05
PRKCH-216ENST00000555542 CXCR1P25024 350 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 EDNRAP25101 427 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 ADSLP30566 484 aaPredicted RBP21.64■■□□□ 1.05
PRKCH-216ENST00000555542 IDH3AP50213 366 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 MAPK11Q15759 364 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 TTMPQ5BVD1 217 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 KRTAP1-3Q8IUG1 177 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 CCDC103Q8IW40 242 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 GTF2H4Q92759 462 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 MUCL1Q96DR8 90 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 EBF4Q9BQW3 602 aa21.64■■□□□ 1.05
PRKCH-216ENST00000555542 ZNF469Q96JG9 3925 aaPredicted RBP21.63■■□□□ 1.05
PRKCH-216ENST00000555542 A0A0G2JPF8 293 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 ZNF716A6NP11 495 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 HNRNPCL2B2RXH8 293 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 HNRNPCL3B7ZW38 293 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 C5orf58C9J3I9 102 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 CLIC1O00299 241 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 EIF1BO60739 113 aaKnown RBP21.63■■□□□ 1.05
PRKCH-216ENST00000555542 HNRNPCL1O60812 293 aaKnown RBP21.63■■□□□ 1.05
PRKCH-216ENST00000555542 MRPL33O75394 65 aaKnown RBP21.63■■□□□ 1.05
PRKCH-216ENST00000555542 CNOT4O95628 575 aaKnown RBP21.63■■□□□ 1.05
PRKCH-216ENST00000555542 HNRNPCL4P0DMR1 293 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 GGT1P19440 569 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 IGHV1-2P23083 117 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 MAP2K6P52564 334 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 AQP5P55064 265 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 C18orf12Q96KH6 178 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 TMEM204Q9BSN7 226 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 PAIP1Q9H074 479 aaKnown RBP21.63■■□□□ 1.05
PRKCH-216ENST00000555542 GSX1Q9H4S2 264 aaPredicted RBP21.63■■□□□ 1.05
PRKCH-216ENST00000555542 CXorf56Q9H5V9 222 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 CCDC167Q9P0B6 97 aa21.63■■□□□ 1.05
PRKCH-216ENST00000555542 CIB4A0PJX0 185 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 THBS1P07996 1170 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 PPA1Q15181 289 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 RGNQ15493 299 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 ZSWIM7Q19AV6 140 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 NCMAPQ5T1S8 102 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 RNF220Q5VTB9 566 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 FBXW9Q5XUX1 488 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 WBP2NLQ6ICG8 309 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 CASP12Q6UXS9 341 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 YTHDF3Q7Z739 585 aaKnown RBP21.62■■□□□ 1.05
PRKCH-216ENST00000555542 LSRQ86X29 649 aaPredicted RBP21.62■■□□□ 1.05
PRKCH-216ENST00000555542 ZNF611Q8N823 705 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 CCDC28BQ9BUN5 200 aa21.62■■□□□ 1.05
PRKCH-216ENST00000555542 INTS9Q9NV88 658 aaKnown RBP21.62■■□□□ 1.05
PRKCH-216ENST00000555542 ARGLU1Q9NWB6 273 aaPredicted RBP21.62■■□□□ 1.05
PRKCH-216ENST00000555542 A0A096LPI6 279 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 ZC3H12DA2A288 527 aaKnown RBP21.61■■□□□ 1.05
PRKCH-216ENST00000555542 CCT8L1PA6NM43 557 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 RAD51DO75771 328 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 IMPDH2P12268 514 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 IDUAP35475 653 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 FADDQ13158 208 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 ZNF311Q5JNZ3 666 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 HDXQ7Z353 690 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 MAL2Q969L2 176 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 SPDL1Q96EA4 605 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 Q96MF0 132 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 ASB6Q9NWX5 421 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 IFT52Q9Y366 437 aa21.61■■□□□ 1.05
PRKCH-216ENST00000555542 RAMP1O60894 148 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 GPIP06744 558 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 INHBBP09529 407 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 NUDT7P0C024 238 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 COX5AP20674 150 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 PTH2RP49190 550 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 MRPL19P49406 292 aaKnown RBP21.6■■□□□ 1.05
PRKCH-216ENST00000555542 SLC16A1P53985 500 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 BSPH1Q075Z2 132 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 OR7A5Q15622 319 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 TIMM23BQ5SRD1 257 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 BIVMQ86UB2 503 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 CLIP4Q8N3C7 705 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 FBXW5Q969U6 566 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 SPATA9Q9BWV2 254 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 TAPBPLQ9BX59 468 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 ADAM19Q9H013 955 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 A4GALTQ9NPC4 353 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 LAMP3Q9UQV4 416 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 SLC9A8Q9Y2E8 581 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 PRR14LQ5THK1 2151 aa21.6■■□□□ 1.05
PRKCH-216ENST00000555542 HMGB1P1B2RPK0 211 aaPredicted RBP21.59■■□□□ 1.05
PRKCH-216ENST00000555542 ACAA2P42765 397 aaKnown RBP21.59■■□□□ 1.05
PRKCH-216ENST00000555542 FAPQ12884 760 aa21.59■■□□□ 1.05
PRKCH-216ENST00000555542 CEACAM7Q14002 265 aa21.59■■□□□ 1.05
PRKCH-216ENST00000555542 OTUD3Q5T2D3 398 aaPredicted RBP21.59■■□□□ 1.05
PRKCH-216ENST00000555542 BLOC1S3Q6QNY0 202 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms