RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 DAG1Q14118 895 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 MICAQ29983 383 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 EXOC3L2Q2M3D2 409 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 OTUD3Q5T2D3 398 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-218ENST00000555213 KDM4DQ6B0I6 523 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 VASNQ6EMK4 673 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 MTFR2Q6P444 385 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 FAHD1Q6P587 224 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 Q6ZPB1 254 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-218ENST00000555213 CHMP1BQ7LBR1 199 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 GRINAQ7Z429 371 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 HIPK1Q86Z02 1210 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 ZDHHC13Q8IUH4 622 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 OR52J3Q8NH60 311 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 MAGEE2Q8TD90 523 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-218ENST00000555213 TFAP2CQ92754 450 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 RPS6KB2Q9UBS0 482 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 TESQ9UGI8 421 aaKnown RBP9.85□□□□□ -0.83
SHMT2-218ENST00000555213 SH3BGRL2Q9UJC5 107 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 CAMK2AQ9UQM7 478 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 ZNF835Q9Y2P0 537 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 SAMHD1Q9Y3Z3 626 aaKnown RBP9.85□□□□□ -0.83
SHMT2-218ENST00000555213 PCDHGB5Q9Y5G0 923 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 AP4B1Q9Y6B7 739 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 NBASA2RRP1 2371 aa9.85□□□□□ -0.83
SHMT2-218ENST00000555213 SHANK1Q9Y566 2161 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 A0A1B0GUH1 482 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 ETV2O00321 342 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 SEC14L5O43304 696 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 MITFO75030 526 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 WISP1O95388 367 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 SNAP29O95721 258 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 STSP08842 583 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 HOXD4P09016 255 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 POLR2IP36954 125 aaKnown RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 CA7P43166 264 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 IDH2P48735 452 aaKnown RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 CDH12P55289 794 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 PER3P56645 1201 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 B3GALT5-AS1P59052 145 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 RPS3AP61247 264 aaKnown RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 ADARB1P78563 741 aaKnown RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 MERTKQ12866 999 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 BCL2A1Q16548 175 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 TMEM44Q2T9K0 475 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 ENTPD8Q5MY95 495 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 C6orf52Q5T4I8 152 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 WBP2NLQ6ICG8 309 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 C3orf33Q6P1S2 294 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 ZNF585AQ6P3V2 769 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 DEF8Q6ZN54 512 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 FGD2Q7Z6J4 655 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 CHERPQ8IWX8 916 aaKnown RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 CADM2Q8N3J6 435 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 OR5M9Q8NGP3 310 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 OR5M1Q8NGP8 315 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 SLC25A43Q8WUT9 341 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 SMPDL3BQ92485 455 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 ZNF570Q96NI8 536 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 ALPK1Q96QP1 1244 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 MBOAT4Q96T53 435 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 MCHR1Q99705 422 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 TIMP4Q99727 224 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 PSD2Q9BQI7 771 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 PRSS27Q9BQR3 290 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 PRDM14Q9GZV8 571 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 VCX3BQ9H321 246 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 REEP1Q9H902 201 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 C8orf4Q9NR00 106 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 PNPLA3Q9NST1 481 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 UBAP1Q9NZ09 502 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 SELENONQ9NZV5 590 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 PDP1Q9P0J1 537 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-218ENST00000555213 TNFRSF10DQ9UBN6 386 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 TINAGQ9UJW2 476 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 SVILO95425 2214 aa9.84□□□□□ -0.83
SHMT2-218ENST00000555213 PCNX3Q9H6A9 2034 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 EML6Q6ZMW3 1958 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 A0A1W2PRQ8 180 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 SH3PXD2BA1X283 911 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 AHRRA9YTQ3 701 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 SHISA8B8ZZ34 492 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 AP3D1O14617 1153 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 ADAMDEC1O15204 470 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 WISP2O76076 250 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 GADD45GO95257 159 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 HPRP00739 348 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 GASTP01350 101 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 H1F0P07305 194 aaKnown RBP9.83□□□□□ -0.84
SHMT2-218ENST00000555213 CPN1P15169 458 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 ZNF708P17019 499 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 CBLP22681 906 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 FKBP2P26885 142 aaKnown RBP9.83□□□□□ -0.84
SHMT2-218ENST00000555213 ACVR2AP27037 513 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 APOBEC1P41238 236 aaKnown RBP9.83□□□□□ -0.84
SHMT2-218ENST00000555213 SLC1A3P43003 542 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 LHX2P50458 406 aa9.83□□□□□ -0.84
SHMT2-218ENST00000555213 POLR2HP52434 150 aaKnown RBP9.83□□□□□ -0.84
SHMT2-218ENST00000555213 MAP2K6P52564 334 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms