RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 MARC2Q969Z3 335 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 EFHD2Q96C19 240 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-213ENST00000554776 CNDP1Q96KN2 507 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 COPS8Q99627 209 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF184Q99676 751 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-213ENST00000554776 MAPKAP1Q9BPZ7 522 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 TUBGCP2Q9BSJ2 902 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 TRIM62Q9BVG3 475 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 C19orf24Q9BVV8 132 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 SRXN1Q9BYN0 137 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF385DQ9H6B1 395 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 YY1AP1Q9H869 796 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 METTL7AQ9H8H3 244 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF702PQ9H963 129 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 TNFRSF19Q9NS68 423 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 THUMPD1Q9NXG2 353 aaKnown RBP2.26□□□□□ -2.05
SCFD1-213ENST00000554776 SEC14L3Q9UDX4 400 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 CA5BQ9Y2D0 317 aa2.26□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF646O15015 1829 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-213ENST00000554776 PNPLA6Q8IY17 1366 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 PLEKHH1Q9ULM0 1364 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 RAI1Q7Z5J4 1906 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 IGHV1OR15-1A0A075B7D0 117 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 TCRBV9S1A1TA0A576 114 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 PCP4L1A6NKN8 68 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 KLLNB2CW77 178 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 IDSB3KWA1 339 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 GFYI3L273 518 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 HIP1O00291 1037 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 DCTN6O00399 190 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 MED7O43513 233 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 TBL1XO60907 577 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 PALMO75781 387 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 STAMBPO95630 424 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 OXSR1O95747 527 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 IGHV3-23P01764 117 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 IGHG4P01861 327 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 GAPDHP04406 335 aaKnown RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 HSPB1P04792 205 aaKnown RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 LGALS2P05162 132 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 P0C879 139 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 CD1EP15812 388 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 NCF2P19878 526 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 NPR2P20594 1047 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 GDI1P31150 447 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 YWHABP31946 246 aaKnown RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 MAP3K8P41279 467 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 CEBPDP49716 269 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 DUSP3P51452 185 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 TPMTP51580 245 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 KRTAP12-2P59991 146 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 ACTR3P61158 418 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 IGLV3-21P80748 117 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 CDK16Q00536 496 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 KIAA0040Q15053 153 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 DUSP7Q16829 419 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 BCL7AQ4VC05 210 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 CARD16Q5EG05 197 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 C9orf129Q5T035 196 aaKnown RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 C1orf220Q5T0J3 134 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 DNM1P46Q6ZS02 220 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 C19orf35Q6ZS72 473 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 PGAP1Q75T13 922 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 HSD17B13Q7Z5P4 300 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 TRIM69Q86WT6 500 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 C17orf82Q86X59 251 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 NBPF5PQ86XG9 351 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-213ENST00000554776 CDH26Q8IXH8 852 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 C11orf42Q8N5U0 333 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 TMEM252Q8N6L7 170 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 OR4K14Q8NGD5 310 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 C12orf42Q96LP6 360 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 CNPY3Q9BT09 278 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 TCHPQ9BT92 498 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 SLITRK2Q9H156 845 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 RBKSQ9H477 322 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 AZI2Q9H6S1 392 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 RNF167Q9H6Y7 350 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 SMYD3Q9H7B4 428 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 SGK2Q9HBY8 427 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 TREM2Q9NZC2 230 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 SUN2Q9UH99 717 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 PIGLQ9Y2B2 252 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
SCFD1-213ENST00000554776 IQANK1A0A1B0GTG1 560 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 ZFP92A6NM28 416 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 A8MXQ7 604 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 AP3B1O00203 1094 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 HSD17B6O14756 317 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 TNFSF11O14788 317 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 PRKAB2O43741 272 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 LYPLA1O75608 230 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 SERF1AO75920 110 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 TSPAN12O95859 305 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 LGI1O95970 557 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 LALBAP00709 142 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 TIMP1P01033 207 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 UQCRFS1P1P0C7P4 283 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 ETS2P15036 469 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 GCFC2P16383 781 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms