RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 TBX5Q99593 518 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 SEMA4CQ9C0C4 833 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 OR51V1Q9H2C8 321 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 MRTO4Q9UKD2 239 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 DIMT1Q9UNQ2 313 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 NPFFR2Q9Y5X5 522 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 B3GALT1Q9Y5Z6 326 aa11.63□□□□□ -0.55
VIPAS39-206ENST00000553888 ADAM10O14672 748 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 HCN1O60741 890 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 SERPINI2O75830 405 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 RCBTB2O95199 551 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 BTF3P20290 206 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 SLC16A1P53985 500 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 CRMP1Q14194 572 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 IL11RAQ14626 422 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 SPHARQ15513 63 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 ATCAYQ86WG3 371 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 C10orf53Q8N6V4 93 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 OR51G2Q8NGK0 314 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 MOSPD2Q8NHP6 518 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 C9orf43Q8TAL5 461 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 DUSP19Q8WTR2 217 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 DNAJA4Q8WW22 397 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 GATAD2BQ8WXI9 593 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 KTI12Q96EK9 354 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 RERGLQ9H628 205 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 OR6C76A6NM76 312 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 CDX4O14627 284 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 FADS1O60427 444 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 PAHP00439 452 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 MRPL3P09001 348 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 LTBQ06643 244 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 SDR9C7Q8NEX9 313 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 OR51L1Q8NGJ5 315 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 OR9Q1Q8NGQ5 310 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 OR4K13Q8NH42 304 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 ZPLD1Q8TCW7 415 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 PPP1R14BQ96C90 147 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 HSPBAP1Q96EW2 488 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 TRMT61AQ96FX7 289 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 ERMAPQ96PL5 475 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 LPAR4Q99677 370 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 KLHL1Q9NR64 748 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 SLC39A1Q9NY26 324 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 SEC14L4Q9UDX3 406 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 ICAM5Q9UMF0 924 aa11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 YARS2Q9Y2Z4 477 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-206ENST00000553888 ALG1L2C9J202 215 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 M0R3G1 203 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 MYL12BO14950 172 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 LIMS3P0CW19 117 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 LIMS4P0CW20 117 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 ACP1P24666 158 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 ZNF791Q3KP31 576 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 LIPKQ5VXJ0 399 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 NIPAL3Q6P499 406 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 FAM198BQ6UWH4 519 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 ARL6IP6Q8N6S5 226 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 SLC37A3Q8NCC5 494 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 TM9SF4Q92544 642 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 PRRG3Q9BZD7 231 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 LAT2Q9GZY6 243 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 IER3IP1Q9Y5U9 82 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 AHCTF1Q8WYP5 2266 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 BLOC1S5-TXNDC5H3BN57 136 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 LALBAP00709 142 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 HMGN1P05114 100 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 UMODP07911 640 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 HIST1H1CP16403 213 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 PNLIPRP2P54317 469 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 SLC26A5P58743 744 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 MC2RQ01718 297 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 PLA2G2CQ5R387 149 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 NXNL2Q5VZ03 156 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 THOC7Q6I9Y2 204 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 DBX2Q6ZNG2 339 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 ZNF440Q8IYI8 595 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 DYNC2LI1Q8TCX1 351 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 KISS1RQ969F8 398 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 TMEM203Q969S6 136 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 MND1Q9BWT6 205 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 CMC2Q9NRP2 79 aa11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 PTRH2Q9Y3E5 179 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-206ENST00000553888 PCNX2A6NKB5 2137 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 SLC22A1O15245 554 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 GPX5O75715 221 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 NADKO95544 446 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 CD59P13987 128 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 TCEA1P23193 301 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 RPS5P46782 204 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 RPS7P62081 194 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 RPS18P62269 152 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 ERVK-25P63136 954 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 RAB40BQ12829 278 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 ITGADQ13349 1161 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 TMEM205Q6UW68 189 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 TMEM99Q8N816 258 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 OR52E2Q8NGJ4 325 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 ZNRF4Q8WWF5 429 aa11.6□□□□□ -0.55
VIPAS39-206ENST00000553888 RASD2Q96D21 266 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms