RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 NPIPA2E9PIF3 369 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 NPIPA3F8WFD2 350 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 BCKDKO14874 412 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 IGF2P01344 180 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 UGT2B15P54855 530 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 LSM11P83369 360 aaKnown RBP eCLIP16.21■□□□□ 0.19
PSEN1-208ENST00000553719 SPIBQ01892 262 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 C1QL3Q5VWW1 255 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 OR2T5Q6IEZ7 315 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 ZFP1Q6P2D0 407 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 C5orf46Q6UWT4 87 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 Q6ZPB1 254 aaPredicted RBP16.21■□□□□ 0.19
PSEN1-208ENST00000553719 ESPNLQ6ZVH7 1005 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 ADGRE4PQ86SQ3 457 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 OR2T29Q8NH02 315 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 POTEKPQ9BYX7 375 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 YY1AP1Q9H869 796 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 MEPEQ9NQ76 525 aaPredicted RBP16.21■□□□□ 0.19
PSEN1-208ENST00000553719 SELENONQ9NZV5 590 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 RALYQ9UKM9 306 aaKnown RBP16.21■□□□□ 0.19
PSEN1-208ENST00000553719 HDGFL3Q9Y3E1 203 aa16.21■□□□□ 0.19
PSEN1-208ENST00000553719 A0A087WUU8 490 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 GJE1A6NN92 205 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 TIPRLO75663 272 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 OPN1LWP04000 364 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 IMPDH2P12268 514 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 CCNA2P20248 432 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 IFNA8P32881 189 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 SFTPDP35247 375 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 PTGS2P35354 604 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 TLE1Q04724 770 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 MYBPHQ13203 477 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 SEC23BQ15437 767 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 ATP6AP1Q15904 470 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 C3AR1Q16581 482 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 TMEM176BQ3YBM2 270 aaPredicted RBP16.2■□□□□ 0.18
PSEN1-208ENST00000553719 C1orf140Q5VVS0 124 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 GFRALQ6UXV0 394 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 OR2V1Q8NHB1 315 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 FAM57AQ8TBR7 257 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 TMEM239Q8WW34 195 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 ACOT11Q8WXI4 607 aaPredicted RBP16.2■□□□□ 0.18
PSEN1-208ENST00000553719 DDIT4LQ96D03 193 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 KTI12Q96EK9 354 aaPredicted RBP16.2■□□□□ 0.18
PSEN1-208ENST00000553719 NTN4Q9HB63 628 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 RELNP78509 3460 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 KIAA1549Q9HCM3 1950 aa16.2■□□□□ 0.18
PSEN1-208ENST00000553719 A0A1W2PNR3 127 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 SEC14L5O43304 696 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 HNRNPRO43390 633 aaKnown RBP16.19■□□□□ 0.18
PSEN1-208ENST00000553719 KRT36O76013 467 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 GADD45GO95257 159 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 CST1P01037 141 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 PTNP21246 168 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 ELF3P78545 371 aaPredicted RBP16.19■□□□□ 0.18
PSEN1-208ENST00000553719 GK3PQ14409 553 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 HMBOX1Q6NT76 420 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 PODNL1Q6PEZ8 512 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 TMPPEQ6ZT21 453 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 P3H2Q8IVL5 708 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 PM20D2Q8IYS1 436 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 UBQLNLQ8IYU4 475 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 MEIOBQ8N635 442 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 ATP6V1C2Q8NEY4 427 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 OR6S1Q8NH40 331 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 SMPDL3BQ92485 455 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 HS6ST2Q96MM7 605 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 S100A14Q9HCY8 104 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 PNPLA3Q9NST1 481 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 STOML1Q9UBI4 398 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 DNAJB9Q9UBS3 223 aa16.19■□□□□ 0.18
PSEN1-208ENST00000553719 RP1L1Q8IWN7 2480 aaPredicted RBP16.19■□□□□ 0.18
PSEN1-208ENST00000553719 TRAV36DV7A0A075B6V5 113 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 SH3PXD2BA1X283 911 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 LIPT2A6NK58 231 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 EIF1AYO14602 144 aaKnown RBP16.18■□□□□ 0.18
PSEN1-208ENST00000553719 TNFSF11O14788 317 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 CLOCKO15516 846 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 PIP5K1CO60331 668 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 SLC19A2O60779 497 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 PMS2P2O95744 297 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 BGLAPP02818 100 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 DIO1P49895 249 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 CTBP2P56545 445 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 SMIM11AP58511 58 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 LTBQ06643 244 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 EXOC3L2Q2M3D2 409 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 GXYLT1Q4G148 440 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 WLSQ5T9L3 541 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 TTC33Q6PID6 262 aaPredicted RBP16.18■□□□□ 0.18
PSEN1-208ENST00000553719 TBPL2Q6SJ96 375 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 MBOAT2Q6ZWT7 520 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 C10orf67Q8IYJ2 551 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 RNF113BQ8IZP6 322 aaKnown RBP16.18■□□□□ 0.18
PSEN1-208ENST00000553719 OR52J3Q8NH60 311 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 OR10D3Q8NH80 312 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 PFN4Q8NHR9 129 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 RNF217Q8TC41 542 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 ZPLD1Q8TCW7 415 aa16.18■□□□□ 0.18
PSEN1-208ENST00000553719 TAAR8Q969N4 342 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms