RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 REM1O75628 298 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 IGKV1D-16P01601 117 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 NGFRP08138 427 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 FAM157BP0CG42 384 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 PNMTP11086 282 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 GBX2P52951 348 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-205ENST00000553474 CLDN20P56880 219 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 CDONQ4KMG0 1287 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 BICRALQ6AI39 1079 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 FAAH2Q6GMR7 532 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 SFXN4Q6P4A7 337 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 BAIAP2L2Q6UXY1 529 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 TMEM105Q8N8V8 129 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF527Q8NB42 609 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 RCBTB1Q8NDN9 531 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 LIPHQ8WWY8 451 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 CREB3L1Q96BA8 519 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 SMIM19Q96E16 107 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 SENP5Q96HI0 755 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-205ENST00000553474 PTCHD1Q96NR3 888 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 ERMAPQ96PL5 475 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-205ENST00000553474 TPSD1Q9BZJ3 242 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 MMP28Q9H239 520 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 RPRD1BQ9NQG5 326 aaKnown RBP11.86□□□□□ -0.51
SHMT2-205ENST00000553474 EXOSC3Q9NQT5 275 aaKnown RBP11.86□□□□□ -0.51
SHMT2-205ENST00000553474 DDX28Q9NUL7 540 aaKnown RBP11.86□□□□□ -0.51
SHMT2-205ENST00000553474 PLCL2Q9UPR0 1127 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF337Q9Y3M9 751 aa11.86□□□□□ -0.51
SHMT2-205ENST00000553474 SMIM30A4D0T7 59 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 SLC9B1P1A6NJY1 282 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 J3QLW9 94 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 GPRIN2O60269 458 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 NCR1O76036 304 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 CSTAP01040 98 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 YES1P07947 543 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 GSTT2P0CG29 244 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 GSTT2BP0CG30 244 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 CT45A8P0DMV1 189 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 CT45A9P0DMV2 189 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 APEHP13798 732 aaKnown RBP11.85□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF19P17023 458 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 TYRP1P17643 537 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 ELK1P19419 428 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 LCN1P31025 176 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 THBS2P35442 1172 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 NR4A2P43354 598 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 PITPNBP48739 271 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 RAB25P57735 213 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 PPP1CAP62136 330 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 RPS4XP62701 263 aaKnown RBP11.85□□□□□ -0.51
SHMT2-205ENST00000553474 PON3Q15166 354 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 P2RY14Q15391 338 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 CT45A2Q5DJT8 189 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 TMEM31Q5JXX7 168 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 IDNKQ5T6J7 187 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 PYHIN1Q6K0P9 492 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 RPL22L1Q6P5R6 122 aaKnown RBP11.85□□□□□ -0.51
SHMT2-205ENST00000553474 KIRREL2Q6UWL6 708 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 CEACAM19Q7Z692 300 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 GKN2Q86XP6 184 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 TCTE3Q8IZS6 198 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 FAM71CQ8NEG0 241 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 OR14A16Q8NHC5 309 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 TBX5Q99593 518 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 LRRC61Q9BV99 259 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 OR10A5Q9H207 317 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 ZCCHC4Q9H5U6 513 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 NRIP3Q9NQ35 241 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 ENAMQ9NRM1 1142 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 ABRACLQ9P1F3 81 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 EXTL2Q9UBQ6 330 aa11.85□□□□□ -0.51
SHMT2-205ENST00000553474 TDRD6O60522 2096 aaKnown RBP11.85□□□□□ -0.51
SHMT2-205ENST00000553474 LINC00854A0A1B0GVQ3 168 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 ZC3H12DA2A288 527 aaKnown RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 FITM1A5D6W6 292 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 HCRTR1O43613 425 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 ADAM11O75078 769 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CELA2BP08218 269 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 RAB3BP20337 219 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 PTNP21246 168 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 ALAS2P22557 587 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 SSTR4P31391 388 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 PYCR1P32322 319 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CXCL12P48061 93 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 DIO1P49895 249 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CSTF1Q05048 431 aaKnown RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF267Q14586 743 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 INSL4Q14641 139 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 ACSM3Q53FZ2 586 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CCDC92Q53HC0 331 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 TSSK4Q6SA08 328 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 NPSR1Q6W5P4 371 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 B3GLCTQ6Y288 498 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 NR2C2APQ86WQ0 139 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 LIX1LQ8IVB5 337 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 CARFQ8N187 725 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 BCORP1Q8N888 145 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 FAM98AQ8NCA5 519 aaKnown RBP11.84□□□□□ -0.51
SHMT2-205ENST00000553474 OR52E2Q8NGJ4 325 aa11.84□□□□□ -0.51
SHMT2-205ENST00000553474 C16orf52Q8NHV5 167 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms