RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 URI1O94763 535 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-209ENST00000553308 VENTXO95231 258 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 STAMBPO95630 424 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 WNT11O96014 354 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 CHEK2O96017 543 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 CHRNGP07510 517 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 OR4A8P0C604 315 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 IMPDH2P12268 514 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 CPA3P15088 417 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 APEX1P27695 318 aaKnown RBP7.9□□□□□ -1.14
SYNE2-209ENST00000553308 MPGP29372 298 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 RPL3P39023 403 aaKnown RBP7.9□□□□□ -1.14
SYNE2-209ENST00000553308 PPOXP50336 477 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 HBA1P69905 142 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 TGFBR3Q03167 851 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 SLC17A1Q14916 467 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 ARHGAP11BQ3KRB8 267 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 LSM12Q3MHD2 195 aaKnown RBP7.9□□□□□ -1.14
SYNE2-209ENST00000553308 FAM174BQ3ZCQ3 159 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 CCDC153Q494R4 210 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 EMBQ6PCB8 327 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 VHLLQ6RSH7 139 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 RINLQ6ZS11 566 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 GRINAQ7Z429 371 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 ADGRG3Q86Y34 549 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 C10orf107Q8IVU9 208 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 ZNF540Q8NDQ6 660 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 SEMA6DQ8NFY4 1073 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 MOAP1Q96BY2 351 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 SLC38A2Q96QD8 506 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 SNX18Q96RF0 628 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 KCNS3Q9BQ31 491 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 GATA5Q9BWX5 397 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-209ENST00000553308 BHLHE41Q9C0J9 482 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-209ENST00000553308 PLK3Q9H4B4 646 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 SEC61A2Q9H9S3 476 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 ATAD3AQ9NVI7 634 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 TMEM181Q9P2C4 612 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 SVEP1Q4LDE5 3571 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 RNF103-CHMP3A0A140T963 221 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TMEM72A0PK05 275 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 ZC3H12DA2A288 527 aaKnown RBP7.89□□□□□ -1.15
SYNE2-209ENST00000553308 CLDN24A6NM45 220 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 B9A039 149 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 AP3D1O14617 1153 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 ANKRD28O15084 1053 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 PEX11AO75192 247 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 SKAP2O75563 359 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-209ENST00000553308 PDE5AO76074 875 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 AK1P00568 194 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TACSTD2P09758 323 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 DAOP14920 347 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 EGR1P18146 543 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 MATN1P21941 496 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 GIFP27352 417 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 MAPK1P28482 360 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 IDH3GP51553 393 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-209ENST00000553308 CHN2P52757 468 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 CDH15P55291 814 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TUBA1BP68363 451 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TUBA4AP68366 448 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 NAAAQ02083 359 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 LGALS3BPQ08380 585 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 FUT5Q11128 374 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 CCNIQ14094 377 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 PCLAFQ15004 111 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TRIP10Q15642 601 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 EFNB3Q15768 340 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 UGT3A2Q3SY77 523 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TBRG1Q3YBR2 411 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 XKR7Q5GH72 579 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TYW3Q6IPR3 259 aaKnown RBP7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TUBA1AQ71U36 451 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TRMT10CQ7L0Y3 403 aaKnown RBP7.89□□□□□ -1.15
SYNE2-209ENST00000553308 C16orf62Q7Z3J2 963 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 C6orf120Q7Z4R8 191 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 CLECL1Q8IZS7 167 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 ZCCHC24Q8N2G6 241 aaKnown RBP7.89□□□□□ -1.15
SYNE2-209ENST00000553308 LINC01356Q8N9X3 169 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 AGR3Q8TD06 166 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 HPS1Q92902 700 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TMEM45BQ96B21 275 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 COQ8BQ96D53 544 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 SLC35G5Q96KT7 338 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 ZNF385AQ96PM9 386 aaKnown RBP7.89□□□□□ -1.15
SYNE2-209ENST00000553308 DUSP26Q9BV47 211 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 KATNB1Q9BVA0 655 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 OR51I1Q9H343 314 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 OCEL1Q9H607 264 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 PARPBPQ9NWS1 579 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TRAPPC4Q9Y296 219 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 SLC35A3Q9Y2D2 325 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 DYSFO75923 2080 aa7.89□□□□□ -1.15
SYNE2-209ENST00000553308 NUP214P35658 2090 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-209ENST00000553308 TMED7-TICAM2A0A0A6YYA0 188 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 DUXAA6NLW8 204 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 hCG_2039718K7EN88 272 aa7.88□□□□□ -1.15
SYNE2-209ENST00000553308 EIF1BO60739 113 aaKnown RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 RGS9O75916 674 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-209ENST00000553308 SNUPNO95149 360 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms