RNA–Protein interactions for RNA: ENST00000552384.1

RBM19-205, Transcript of RNA binding motif protein 19, human

TSL 3

Gene RBM19, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM19-205	ENST00000552384	PINK1	Q9BXM7	581 aa		19	■□□□□ 0.63
RBM19-205	ENST00000552384	REEP1	Q9H902	201 aa		19	■□□□□ 0.63
RBM19-205	ENST00000552384	EXOSC3	Q9NQT5	275 aa	Known RBP	19	■□□□□ 0.63
RBM19-205	ENST00000552384	VNN3	Q9NY84	501 aa		19	■□□□□ 0.63
RBM19-205	ENST00000552384	COQ3	Q9NZJ6	369 aa		19	■□□□□ 0.63
RBM19-205	ENST00000552384	RNF6	Q9Y252	685 aa		19	■□□□□ 0.63
RBM19-205	ENST00000552384		A1L4Q6	167 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	KDM4E	B2RXH2	506 aa	Predicted RBP	18.99	■□□□□ 0.63
RBM19-205	ENST00000552384		G3V2T6	193 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384		H3BML4	177 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	DENR	O43583	198 aa	Known RBP	18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	E2F6	O75461	281 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	NTN1	O95631	604 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	NUDT14	O95848	222 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	PABPC4L	P0CB38	370 aa	Known RBP	18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	UBTFL6	P0CB48	400 aa	Predicted RBP	18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	NID1	P14543	1247 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	DNAJA1	P31689	397 aa	Known RBP	18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	TIMP3	P35625	211 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	ALDH3A2	P51648	485 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	CLDN15	P56746	228 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	SRY	Q05066	204 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	FOXF1	Q12946	379 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	TOMM34	Q15785	309 aa	Predicted RBP	18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	DHRS4L2	Q6PKH6	230 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	MEIOB	Q8N635	442 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	TMCO5A	Q8N6Q1	288 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	ZNF524	Q96C55	264 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	RDH12	Q96NR8	316 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	EPYC	Q99645	322 aa		18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	RSPO3	Q9BXY4	272 aa	Predicted RBP	18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	PLEKHB1	Q9UF11	243 aa	Predicted RBP	18.99	■□□□□ 0.63
RBM19-205	ENST00000552384	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384		A0A0G2JNJ9	132 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	MBD3L4	A6NDZ8	208 aa	Predicted RBP	18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	MBD3L3	A6NE82	208 aa	Predicted RBP	18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	MBD3L5	A6NJ08	208 aa	Predicted RBP	18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	CLDN24	A6NM45	220 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	TOX	O94900	526 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	THBS1	P07996	1170 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	PRKCA	P17252	672 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	TNFRSF1B	P20333	461 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	ELK4	P28324	431 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	CHRNB4	P30926	498 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	PRKAR1B	P31321	381 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	CEACAM8	P31997	349 aa	Predicted RBP	18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	SUCLG1	P53597	346 aa	Known RBP	18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	DLX5	P56178	289 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	PPP2R2B	Q00005	443 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	QPRT	Q15274	297 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	CDSN	Q15517	529 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	GGN	Q86UU5	652 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	OR52P1P	Q8NH57	321 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	MRGPRX4	Q96LA9	322 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	TRIB1	Q96RU8	372 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	AMBRA1	Q9C0C7	1298 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	CLCF1	Q9UBD9	225 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384		Q9UFV3	132 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	SH3GLB1	Q9Y371	365 aa		18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	KLF2	Q9Y5W3	355 aa	Predicted RBP	18.98	■□□□□ 0.63
RBM19-205	ENST00000552384	USP9Y	O00507	2555 aa	Predicted RBP	18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	CLCA1	A8K7I4	914 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	DLGAP1	O14490	977 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	CYP7B1	O75881	506 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	CLDN14	O95500	239 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	ALPL	P05186	524 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	IL7R	P16871	459 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	RHCE	P18577	417 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	PGC	P20142	388 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	OR1E2	P47887	323 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	CCR4	P51679	360 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	IST1	P53990	364 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	CLDN20	P56880	219 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	RAC1	P63000	192 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	LIN52	Q52LA3	116 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	TBPL2	Q6SJ96	375 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	TMEM179B	Q7Z7N9	219 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	STK32C	Q86UX6	486 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	CARM1	Q86X55	608 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	CCDC71	Q8IV32	467 aa	Predicted RBP	18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	ST8SIA1	Q92185	356 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	CNOT9	Q92600	299 aa	Known RBP	18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	PIP5K1A	Q99755	562 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	ARHGDIG	Q99819	225 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	RBM4B	Q9BQ04	359 aa	Known RBP	18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	RBM4	Q9BWF3	364 aa	Known RBP	18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	CACYBP	Q9HB71	228 aa	Known RBP	18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	DNAJB12	Q9NXW2	375 aa	Known RBP	18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	SMPD3	Q9NY59	655 aa	Predicted RBP	18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	IFT52	Q9Y366	437 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	SAMHD1	Q9Y3Z3	626 aa	Known RBP	18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	ARHGAP21	Q5T5U3	1957 aa		18.97	■□□□□ 0.63
RBM19-205	ENST00000552384	PTPN13	Q12923	2485 aa		18.96	■□□□□ 0.63
RBM19-205	ENST00000552384	DIRAS1	O95057	198 aa		18.96	■□□□□ 0.63
RBM19-205	ENST00000552384	LGI1	O95970	557 aa		18.96	■□□□□ 0.63
RBM19-205	ENST00000552384	GP1BB	P13224	206 aa		18.96	■□□□□ 0.63
RBM19-205	ENST00000552384	SLC6A8	P48029	635 aa		18.96	■□□□□ 0.63
RBM19-205	ENST00000552384	ARHGDIA	P52565	204 aa		18.96	■□□□□ 0.63
RBM19-205	ENST00000552384	EEF1A1	P68104	462 aa	Known RBP	18.96	■□□□□ 0.63

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms