RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	KLK1	P06870	262 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CCDC175	P0C221	793 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	LINGO3	P0C6S8	592 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	IGLL1	P15814	213 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MAGEB1	P43366	347 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PRIM2	P49643	509 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CLK3	P49761	638 aa	Known RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MRPS22	P82650	360 aa	Known RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PRR5	P85299	388 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	STX1A	Q16623	288 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	KLHL22	Q53GT1	634 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	KRT80	Q6KB66	452 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SLC48A1	Q6P1K1	146 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ANKRD16	Q6P6B7	361 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SASS6	Q6UVJ0	657 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260		Q6ZSV7	163 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	C9orf139	Q6ZV77	190 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	FRA10AC1	Q70Z53	315 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	KRT77	Q7Z794	578 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CCDC103	Q8IW40	242 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	C17orf78	Q8N4C9	275 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OR4F15	Q8NGB8	312 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OR9A2	Q8NGT5	310 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ANKRD49	Q8WVL7	239 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	KLHL29	Q96CT2	875 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SLC47A1	Q96FL8	570 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PDLIM5	Q96HC4	596 aa	Known RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF681	Q96N22	645 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ANKRD27	Q96NW4	1050 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	BPIFA3	Q9BQP9	254 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF416	Q9BWM5	594 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NAT10	Q9H0A0	1025 aa	Known RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	WIPI2	Q9Y4P8	454 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CACNG2	Q9Y698	323 aa		4.98	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TRAV40	A0A0B4J280	105 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF716	A6NP11	495 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TRAF3IP2	O43734	574 aa	Predicted RBP	4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	GPR137B	O60478	399 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	STK16	O75716	305 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	H6PD	O95479	791 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PLAT	P00750	562 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SCG5	P05408	212 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF12	P17014	697 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF37A	P17032	561 aa	Predicted RBP	4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MSX2	P35548	267 aa	Predicted RBP	4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CETN2	P41208	172 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	RAD52	P43351	418 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MAGEA1	P43355	309 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ALDH9A1	P49189	494 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	RAC3	P60763	192 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SEC61A1	P61619	476 aa	Known RBP	4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	SNTB2	Q13425	540 aa	Known RBP	4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	E2F2	Q14209	437 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TGFBI	Q15582	683 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TRADD	Q15628	312 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TRIP13	Q15645	432 aa	Predicted RBP	4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TOMM34	Q15785	309 aa	Predicted RBP	4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TBCC	Q15814	346 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ERCC6L	Q2NKX8	1250 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF385B	Q569K4	471 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TSPO2	Q5TGU0	170 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZFAND6	Q6FIF0	208 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ABLIM2	Q6H8Q1	611 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	KLHL24	Q6TFL4	600 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260		Q6YL49	198 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	ZNF620	Q6ZNG0	422 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	NUDT13	Q86X67	352 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	GAS2L3	Q86XJ1	694 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CCDC89	Q8N998	374 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OR7G2	Q8NG99	324 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OR52E2	Q8NGJ4	325 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	OR4C3	Q8NH37	302 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CALML6	Q8TD86	181 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	DNAJC7	Q99615	494 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CENPK	Q9BS16	269 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	FAM167B	Q9BTA0	163 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	TSGA10	Q9BZW7	698 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	MMP28	Q9H239	520 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	UBAP1	Q9NZ09	502 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	UPB1	Q9UBR1	384 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	CTNNAL1	Q9UBT7	734 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	VWA7	Q9Y334	891 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	PCDHA9	Q9Y5H5	950 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	HECTD4	Q9Y4D8	3996 aa		4.97	□□□□□ -1.61
RACGAP1-223	ENST00000551260	IGKV3D-15	A0A087WSY6	115 aa		4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	FOXE1	O00358	373 aa	Predicted RBP	4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	XPNPEP2	O43895	674 aa		4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	NPHS1	O60500	1241 aa		4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	MRPL33	O75394	65 aa	Known RBP	4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	OXSR1	O95747	527 aa	Predicted RBP	4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	IGLV1-44	P01699	117 aa		4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	MELTF	P08582	738 aa		4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	MYZAP	P0CAP1	466 aa		4.96	□□□□□ -1.62
RACGAP1-223	ENST00000551260	PTX3	P26022	381 aa	Predicted RBP	4.96	□□□□□ -1.62

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