RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 GSX1Q9H4S2 264 aaPredicted RBP11.52□□□□□ -0.57
NPAS3-209ENST00000551008 ZNF385DQ9H6B1 395 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 SERINC1Q9NRX5 453 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 HDGFL3Q9Y3E1 203 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 CSPG4Q6UVK1 2322 aa11.52□□□□□ -0.57
NPAS3-209ENST00000551008 A0A096LPI6 279 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 CFAP73A6NFT4 308 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 CLIC1O00299 241 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 POLR3GO15318 223 aaPredicted RBP11.51□□□□□ -0.57
NPAS3-209ENST00000551008 FRS3O43559 492 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 DNPH1O43598 174 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 LYZL6O75951 148 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 IL7RP16871 459 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 SLC1A3P43003 542 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 CLK1P49759 484 aaKnown RBP11.51□□□□□ -0.57
NPAS3-209ENST00000551008 POLR2HP52434 150 aaKnown RBP11.51□□□□□ -0.57
NPAS3-209ENST00000551008 AQP5P55064 265 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 RIPPLY3P57055 190 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 CSNK2A1P68400 391 aaPredicted RBP11.51□□□□□ -0.57
NPAS3-209ENST00000551008 ITGADQ13349 1161 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 PEX5LQ8IYB4 626 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 STEAP2Q8NFT2 490 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 CKAP2Q8WWK9 683 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 NEUROG1Q92886 237 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 RMND5AQ9H871 391 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 A4GALTQ9NPC4 353 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 NPAP1Q9NZP6 1156 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 VAPAQ9P0L0 249 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 EDARQ9UNE0 448 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 GMEB1Q9Y692 573 aa11.51□□□□□ -0.57
NPAS3-209ENST00000551008 CR1P17927 2039 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 UQCRHLA0A096LP55 91 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 TMEM229AB2RXF0 380 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 NR5A2O00482 541 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 ZNF208O43345 1280 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 NPIPB7O75200 414 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 PGM3O95394 542 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 ANP32DO95626 131 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 IGHV3-9P01782 118 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 THBS1P07996 1170 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 ADSLP30566 484 aaPredicted RBP11.5□□□□□ -0.57
NPAS3-209ENST00000551008 P2RY4P51582 365 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 CRISP3P54108 245 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 OR2B6P58173 313 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 NKX6-1P78426 367 aaPredicted RBP11.5□□□□□ -0.57
NPAS3-209ENST00000551008 BNIP2Q12982 314 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 P2RY6Q15077 328 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 LIN52Q52LA3 116 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 NCMAPQ5T1S8 102 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 BHLHA15Q7RTS1 189 aaPredicted RBP11.5□□□□□ -0.57
NPAS3-209ENST00000551008 GALNT5Q7Z7M9 940 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 SERPINA11Q86U17 422 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 ZNF433Q8N7K0 673 aaPredicted RBP11.5□□□□□ -0.57
NPAS3-209ENST00000551008 KISS1RQ969F8 398 aaPredicted RBP11.5□□□□□ -0.57
NPAS3-209ENST00000551008 SPDL1Q96EA4 605 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 THOC1Q96FV9 657 aaKnown RBP11.5□□□□□ -0.57
NPAS3-209ENST00000551008 SMR3AQ99954 134 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 SPATA9Q9BWV2 254 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 BCL2L10Q9HD36 194 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 CCDC167Q9P0B6 97 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 TMEM181Q9P2C4 612 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 TRAPPC4Q9Y296 219 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 FLVCR1Q9Y5Y0 555 aa11.5□□□□□ -0.57
NPAS3-209ENST00000551008 SPIN1Q9Y657 262 aaPredicted RBP11.5□□□□□ -0.57
NPAS3-209ENST00000551008 A0A0G2JPF8 293 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 DPRXA6NFQ7 191 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 LIPT2A6NK58 231 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 HMGB1P1B2RPK0 211 aaPredicted RBP11.49□□□□□ -0.57
NPAS3-209ENST00000551008 HNRNPCL2B2RXH8 293 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 HNRNPCL3B7ZW38 293 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 PDLIM1O00151 329 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 HS3ST1O14792 307 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 HNRNPCL1O60812 293 aaKnown RBP11.49□□□□□ -0.57
NPAS3-209ENST00000551008 ITGA5P08648 1049 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 HNRNPCL4P0DMR1 293 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 ARAFP10398 606 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 FPR1P21462 350 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 IL32P24001 234 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 HTR3AP46098 478 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 ATP4BP51164 291 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 PPP2R2AP63151 447 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 HOXC5Q00444 222 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 SLC17A1Q14916 467 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 Q5PR19 223 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 DLEU7Q6UYE1 221 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 C20orf204Q6ZNR8 217 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 ZNF440Q8IYI8 595 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 LRRC75A-AS1Q8N1F1 130 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 CIARTQ8N365 385 aaPredicted RBP11.49□□□□□ -0.57
NPAS3-209ENST00000551008 ZIC4Q8N9L1 334 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 PIGXQ8TBF5 258 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 STON2Q8WXE9 905 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 C3orf49Q96BT1 292 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 CCL19Q99731 98 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 WFDC6Q9BQY6 131 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 CPPED1Q9BRF8 314 aaPredicted RBP11.49□□□□□ -0.57
NPAS3-209ENST00000551008 HDHD5Q9BXW7 423 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 POTEKPQ9BYX7 375 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 VIPAS39Q9H9C1 493 aa11.49□□□□□ -0.57
NPAS3-209ENST00000551008 INTS9Q9NV88 658 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 262 ms