RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 OR51I1Q9H343 314 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 FKRPQ9H9S5 495 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 TMEM181Q9P2C4 612 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 LPAR3Q9UBY5 353 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 PRDM4Q9UKN5 801 aa11.29□□□□□ -0.6
PTCH1-221ENST00000550914 PRSS51A0A1B0GVH4 220 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 M0R1B8 84 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 FAAHO00519 579 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 ZNF208O43345 1280 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 BPGMP07738 259 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 OR12D1P0DN82 309 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 PTNP21246 168 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 KHKP50053 298 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 EFNA4P52798 201 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 CASP9P55211 416 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 SLC35A1P78382 337 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 KCNJ10P78508 379 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 TXNL4AP83876 142 aaKnown RBP11.28□□□□□ -0.6
PTCH1-221ENST00000550914 TGFBR3Q03167 851 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 CHRNB3Q05901 458 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 SPOCK1Q08629 439 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 DPY19L1Q2PZI1 675 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 ANXA8L1Q5VT79 327 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 SAXO2Q658L1 398 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 B3GLCTQ6Y288 498 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 WDR31Q8NA23 367 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 C10orf105Q8TEF2 133 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 XAGE5Q8WWM1 108 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 TESCQ96BS2 214 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 NEURL3Q96EH8 262 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 ROPN1BQ9BZX4 212 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-221ENST00000550914 ROPN1Q9HAT0 212 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-221ENST00000550914 SLC17A5Q9NRA2 495 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-221ENST00000550914 SLC9A8Q9Y2E8 581 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 AMDHD2Q9Y303 409 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 FLVCR1Q9Y5Y0 555 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 PMF1-BGLAPU3KQ54 211 aa11.28□□□□□ -0.6
PTCH1-221ENST00000550914 PHF1O43189 567 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-221ENST00000550914 BCAS1O75363 584 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-221ENST00000550914 SPAG7O75391 227 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 SNUPNO95149 360 aaKnown RBP11.27□□□□□ -0.61
PTCH1-221ENST00000550914 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-221ENST00000550914 APOBEC3AP31941 199 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-221ENST00000550914 RYKP34925 604 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 ETV4P43268 484 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 POLR2HP52434 150 aaKnown RBP11.27□□□□□ -0.61
PTCH1-221ENST00000550914 OR2B6P58173 313 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 HPCAP84074 193 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 FUT5Q11128 374 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 SLC17A1Q14916 467 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 CYB5R2Q6BCY4 276 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 TNFAIP8L2Q6P589 184 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-221ENST00000550914 CASP12Q6UXS9 341 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 OLIG3Q7RTU3 272 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 CCDC103Q8IW40 242 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 LRRC34Q8IZ02 419 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 CLEC4FQ8N1N0 589 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 ZNF525Q8N782 197 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 NANOS1Q8WY41 292 aaKnown RBP11.27□□□□□ -0.61
PTCH1-221ENST00000550914 DDIT4LQ96D03 193 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 ZG16BQ96DA0 208 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 BOD1Q96IK1 185 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 KCNK17Q96T54 332 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 NAA11Q9BSU3 229 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-221ENST00000550914 BEX2Q9BXY8 128 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 DPY30Q9C005 99 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 OR11A1Q9GZK7 315 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 PIF1Q9H611 641 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 UPB1Q9UBR1 384 aa11.27□□□□□ -0.61
PTCH1-221ENST00000550914 TMED7-TICAM2A0A0A6YYA0 188 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 A0A1W2PR80 420 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 WNT11O96014 354 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 USF1P22415 310 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-221ENST00000550914 PAX7P23759 505 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 MPGP29372 298 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 SLC1A3P43003 542 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 IDH2P48735 452 aaKnown RBP11.26□□□□□ -0.61
PTCH1-221ENST00000550914 CLNS1AP54105 237 aaKnown RBP11.26□□□□□ -0.61
PTCH1-221ENST00000550914 FOXG1P55316 489 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-221ENST00000550914 PHC1P78364 1004 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 PLAURQ03405 335 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 CASP8Q14790 479 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 PAQR6Q6TCH4 344 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 NUDCD3Q8IVD9 361 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 KIRREL3Q8IZU9 778 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 OR52E4Q8NGH9 312 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 RAB8BQ92930 207 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 TMEM45BQ96B21 275 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 TRNT1Q96Q11 434 aaKnown RBP11.26□□□□□ -0.61
PTCH1-221ENST00000550914 SF3B5Q9BWJ5 86 aaKnown RBP11.26□□□□□ -0.61
PTCH1-221ENST00000550914 AKTIPQ9H8T0 292 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 OBP2BQ9NPH6 170 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 SLC7A10Q9NS82 523 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-221ENST00000550914 TMED7Q9Y3B3 224 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 ATP23Q9Y6H3 246 aa11.26□□□□□ -0.61
PTCH1-221ENST00000550914 AGAP5A6NIR3 686 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 NDUFS8O00217 210 aa11.25□□□□□ -0.61
PTCH1-221ENST00000550914 HMGN4O00479 90 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms