RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 TSPAN2O60636 221 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 PEPDP12955 493 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 CCL4P13236 92 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 CELP19835 753 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 RNF4P78317 190 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 DCDP81605 110 aaKnown RBP19.13■□□□□ 0.65
PRDM4-205ENST00000550376 CCDC157Q569K6 752 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 RABEPKQ7Z6M1 372 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 ATG4DQ86TL0 474 aaPredicted RBP19.13■□□□□ 0.65
PRDM4-205ENST00000550376 PPP1R3BQ86XI6 285 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 NLGN4YQ8NFZ3 816 aaPredicted RBP19.13■□□□□ 0.65
PRDM4-205ENST00000550376 RASD2Q96D21 266 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 GFM1Q96RP9 751 aaKnown RBP19.13■□□□□ 0.65
PRDM4-205ENST00000550376 ARHGAP9Q9BRR9 750 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 BARHL1Q9BZE3 327 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 CCDC86Q9H6F5 360 aaKnown RBP19.13■□□□□ 0.65
PRDM4-205ENST00000550376 HMG20AQ9NP66 347 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 ZNF346Q9UL40 294 aaKnown RBP19.13■□□□□ 0.65
PRDM4-205ENST00000550376 STUB1Q9UNE7 303 aa19.13■□□□□ 0.65
PRDM4-205ENST00000550376 EXOGQ9Y2C4 368 aaKnown RBP19.13■□□□□ 0.65
PRDM4-205ENST00000550376 EXOSC1Q9Y3B2 195 aaKnown RBP19.13■□□□□ 0.65
PRDM4-205ENST00000550376 KIF26BQ2KJY2 2108 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 TTC36A6NLP5 189 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 FAM171A2A8MVW0 826 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 CPEP16870 476 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 AQP2P41181 271 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 PSMD7P51665 324 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 LTBQ06643 244 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 ZNF846Q147U1 533 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 CROCCP3Q8IVE0 287 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 RFLNBQ8N5W9 214 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 APCDD1LQ8NCL9 501 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 FNDC8Q8TC99 324 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 ABTB1Q969K4 478 aaPredicted RBP19.12■□□□□ 0.65
PRDM4-205ENST00000550376 TP53INP1Q96A56 240 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 NMNAT3Q96T66 252 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 HDHD5Q9BXW7 423 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 TBL1XR1Q9BZK7 514 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 TXNL4BQ9NX01 149 aaKnown RBP19.12■□□□□ 0.65
PRDM4-205ENST00000550376 SLC6A6P31641 620 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 SQSTM1Q13501 440 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 TIMM50Q3ZCQ8 353 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 CRTC2Q53ET0 693 aaPredicted RBP19.12■□□□□ 0.65
PRDM4-205ENST00000550376 LYPD4Q6UWN0 246 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 ZMYND19Q96E35 227 aaPredicted RBP19.12■□□□□ 0.65
PRDM4-205ENST00000550376 TIMP4Q99727 224 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 FBXO8Q9NRD0 319 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 ICAM5Q9UMF0 924 aa19.12■□□□□ 0.65
PRDM4-205ENST00000550376 CCDC182A6NF36 153 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 CDC40O60508 579 aaKnown RBP eCLIP19.11■□□□□ 0.65
PRDM4-205ENST00000550376 F13BP05160 661 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 ANKRD34CP0C6C1 535 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 HK1P19367 917 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 FBXW4P57775 412 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 YOD1Q5VVQ6 348 aaPredicted RBP19.11■□□□□ 0.65
PRDM4-205ENST00000550376 DUSP19Q8WTR2 217 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 SEC14L4Q9UDX3 406 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 SSR3Q9UNL2 185 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 SIRT4Q9Y6E7 314 aaPredicted RBP19.11■□□□□ 0.65
PRDM4-205ENST00000550376 J3QRE1 110 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 NDUFB2O95178 105 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 RPS5P46782 204 aaKnown RBP19.11■□□□□ 0.65
PRDM4-205ENST00000550376 CAV3P56539 151 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 FABP5Q01469 135 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 RPL13AP3Q6NVV1 102 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 SLITRK4Q8IW52 837 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 CHRNA9Q9UGM1 479 aa19.11■□□□□ 0.65
PRDM4-205ENST00000550376 MRTO4Q9UKD2 239 aaKnown RBP19.11■□□□□ 0.65
PRDM4-205ENST00000550376 ALOX12BO75342 701 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 CDRT1O95170 752 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 IGHA1P01876 353 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 ZNF3P17036 446 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 ADH7P40394 386 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 EMP2P54851 167 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 BICRALQ6AI39 1079 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 GID4Q8IVV7 300 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 NAT6Q93015 286 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 NPAS1Q99742 590 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 KATNB1Q9BVA0 655 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 TGIF2Q9GZN2 237 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 POLE4Q9NR33 117 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 SF3B6Q9Y3B4 125 aaKnown RBP19.1■□□□□ 0.65
PRDM4-205ENST00000550376 E9PI62 339 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 ZNF322Q6U7Q0 402 aaPredicted RBP19.1■□□□□ 0.65
PRDM4-205ENST00000550376 KLHL36Q8N4N3 616 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 ACBD7Q8N6N7 88 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 ZNF441Q8N8Z8 693 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 SLC35B4Q969S0 331 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 MMP27Q9H306 513 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 GALNT9Q9HCQ5 603 aa19.1■□□□□ 0.65
PRDM4-205ENST00000550376 DAPL1A0PJW8 107 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 IRGMA1A4Y4 181 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 MEN1O00255 615 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 OR7A10O76100 309 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 ENDOUP21128 410 aaKnown RBP19.09■□□□□ 0.65
PRDM4-205ENST00000550376 MADCAM1Q13477 382 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 PAPD4Q6PIY7 484 aaKnown RBP19.09■□□□□ 0.65
PRDM4-205ENST00000550376 SSX6Q7RTT6 188 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 OVCH1Q7RTY7 1134 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 METTL21AQ8WXB1 218 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms