RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 ANP32DO95626 131 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 CD3EP07766 207 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 TFPTP0C1Z6 253 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 HOXB4P17483 251 aaPredicted RBP17.26■□□□□ 0.35
ATF1-202ENST00000549612 CCNA2P20248 432 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 IGHV1-2P23083 117 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 TACR3P29371 465 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 ADSLP30566 484 aaPredicted RBP17.26■□□□□ 0.35
ATF1-202ENST00000549612 CRATP43155 626 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 MRPL19P49406 292 aaKnown RBP17.26■□□□□ 0.35
ATF1-202ENST00000549612 CRISP3P54108 245 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 DSTNP60981 165 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 LIN52Q52LA3 116 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 SSX8Q7RTT4 187 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 OR52P1PQ8NH57 321 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 SLC38A5Q8WUX1 472 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 VPS33AQ96AX1 596 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 APH1AQ96BI3 265 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 DDIT4LQ96D03 193 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 AURKBQ96GD4 344 aaPredicted RBP17.26■□□□□ 0.35
ATF1-202ENST00000549612 Q96MF0 132 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 SMR3AQ99954 134 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 ADAM19Q9H013 955 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 CXorf56Q9H5V9 222 aa17.26■□□□□ 0.35
ATF1-202ENST00000549612 THUMPD1Q9NXG2 353 aaKnown RBP17.26■□□□□ 0.35
ATF1-202ENST00000549612 NOSIPQ9Y314 301 aaKnown RBP17.26■□□□□ 0.35
ATF1-202ENST00000549612 USF3Q68DE3 2245 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 RAMP1O60894 148 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 PGM3O95394 542 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 BCHEP06276 602 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 OR2B6P58173 313 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 SLC35A1P78382 337 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 CAPRIN1Q14444 709 aaKnown RBP17.25■□□□□ 0.35
ATF1-202ENST00000549612 PPA1Q15181 289 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 TIMM23BQ5SRD1 257 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 FBXW9Q5XUX1 488 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 ZNF836Q6ZNA1 936 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 ATG4DQ86TL0 474 aaPredicted RBP17.25■□□□□ 0.35
ATF1-202ENST00000549612 P2RY8Q86VZ1 359 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 CCDC103Q8IW40 242 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 ZNF433Q8N7K0 673 aaPredicted RBP17.25■□□□□ 0.35
ATF1-202ENST00000549612 GTF2H4Q92759 462 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 DNAJA3Q96EY1 480 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 RLIMQ9NVW2 624 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 ZANQ9Y493 2812 aa17.25■□□□□ 0.35
ATF1-202ENST00000549612 CLOCKO15516 846 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 EIF1BO60739 113 aaKnown RBP17.24■□□□□ 0.35
ATF1-202ENST00000549612 TGDSO95455 350 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 THBS1P07996 1170 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 IMPDH2P12268 514 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 GGT1P19440 569 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 NTF4P34130 210 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 ACAA2P42765 397 aaKnown RBP17.24■□□□□ 0.35
ATF1-202ENST00000549612 BSPH1Q075Z2 132 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 STK11Q15831 433 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 ZSWIM7Q19AV6 140 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 C6orf10Q5SRN2 563 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 RNF220Q5VTB9 566 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 VRK2Q86Y07 508 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 FBXW5Q969U6 566 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 BDH2Q9BUT1 245 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 PAIP1Q9H074 479 aaKnown RBP17.24■□□□□ 0.35
ATF1-202ENST00000549612 MALT1Q9UDY8 824 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 ZNF443Q9Y2A4 671 aaPredicted RBP17.24■□□□□ 0.35
ATF1-202ENST00000549612 CADP27708 2225 aa17.24■□□□□ 0.35
ATF1-202ENST00000549612 ZC3H12DA2A288 527 aaKnown RBP17.23■□□□□ 0.35
ATF1-202ENST00000549612 DPRXA6NFQ7 191 aa17.23■□□□□ 0.35
ATF1-202ENST00000549612 OR5H1A6NKK0 313 aa17.23■□□□□ 0.35
ATF1-202ENST00000549612 FAM171A2A8MVW0 826 aa17.23■□□□□ 0.35
ATF1-202ENST00000549612 H7C1Q1 480 aa17.23■□□□□ 0.35
ATF1-202ENST00000549612 HOXB9P17482 250 aaPredicted RBP17.23■□□□□ 0.35
ATF1-202ENST00000549612 ZNF672Q499Z4 452 aaPredicted RBP17.23■□□□□ 0.35
ATF1-202ENST00000549612 UBE2J2Q8N2K1 259 aa17.23■□□□□ 0.35
ATF1-202ENST00000549612 CIARTQ8N365 385 aaPredicted RBP17.23■□□□□ 0.35
ATF1-202ENST00000549612 MUCL1Q96DR8 90 aa17.23■□□□□ 0.35
ATF1-202ENST00000549612 TMEM19Q96HH6 336 aa17.23■□□□□ 0.35
ATF1-202ENST00000549612 TCF7L2Q9NQB0 619 aa17.23■□□□□ 0.35
ATF1-202ENST00000549612 PCDHB14Q9Y5E9 798 aa17.23■□□□□ 0.35
ATF1-202ENST00000549612 A0A0G2JPF8 293 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 TMEM247A6NEH6 219 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 HNRNPCL2B2RXH8 293 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 HNRNPCL3B7ZW38 293 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 HNRNPCL1O60812 293 aaKnown RBP17.22■□□□□ 0.35
ATF1-202ENST00000549612 MRPL33O75394 65 aaKnown RBP17.22■□□□□ 0.35
ATF1-202ENST00000549612 IGHV3-9P01782 118 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 DANCRP0C864 163 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 GKN3PP0CG01 181 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 HNRNPCL4P0DMR1 293 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 BMP2P12643 396 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 STX1BP61266 288 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 RPS4XP62701 263 aaKnown RBP17.22■□□□□ 0.35
ATF1-202ENST00000549612 SLC17A1Q14916 467 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 LARS2Q15031 903 aaKnown RBP17.22■□□□□ 0.35
ATF1-202ENST00000549612 RGNQ15493 299 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 RPS26P11Q5JNZ5 115 aaPredicted RBP17.22■□□□□ 0.35
ATF1-202ENST00000549612 PRAMEF8Q5VWM4 474 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 PRAMEF7Q5VXH5 474 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 WBP2NLQ6ICG8 309 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 SLC2A7Q6PXP3 512 aa17.22■□□□□ 0.35
ATF1-202ENST00000549612 PAQR6Q6TCH4 344 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms