RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 CCL27Q9Y4X3 112 aa15.08■□□□□ 0
CUX1-213ENST00000549414 UNC13CQ8NB66 2214 aa15.08■□□□□ 0
CUX1-213ENST00000549414 ZNF638Q14966 1978 aaKnown RBP15.08■□□□□ 0
CUX1-213ENST00000549414 KDM4EB2RXH2 506 aaPredicted RBP15.07■□□□□ 0
CUX1-213ENST00000549414 SNRPBP14678 240 aaKnown RBP15.07■□□□□ 0
CUX1-213ENST00000549414 GABRA5P31644 462 aa15.07■□□□□ 0
CUX1-213ENST00000549414 TSFMP43897 325 aaKnown RBP15.07■□□□□ 0
CUX1-213ENST00000549414 SRYQ05066 204 aa15.07■□□□□ 0
CUX1-213ENST00000549414 PRKCDQ05655 676 aa15.07■□□□□ 0
CUX1-213ENST00000549414 PRSS36Q5K4E3 855 aa15.07■□□□□ 0
CUX1-213ENST00000549414 LRRC56Q8IYG6 542 aaPredicted RBP15.07■□□□□ 0
CUX1-213ENST00000549414 CCDC120Q96HB5 630 aa15.07■□□□□ 0
CUX1-213ENST00000549414 HINT3Q9NQE9 182 aaKnown RBP15.07■□□□□ 0
CUX1-213ENST00000549414 C2orf42Q9NWW7 574 aa15.07■□□□□ 0
CUX1-213ENST00000549414 PTRH2Q9Y3E5 179 aaKnown RBP15.07■□□□□ 0
CUX1-213ENST00000549414 LRRTM2O43300 516 aa15.07■□□□□ 0
CUX1-213ENST00000549414 MOSPD3O75425 235 aa15.07■□□□□ 0
CUX1-213ENST00000549414 ZNF432O94892 652 aa15.07■□□□□ 0
CUX1-213ENST00000549414 E2F1Q01094 437 aa15.07■□□□□ 0
CUX1-213ENST00000549414 SLAMF7Q9NQ25 335 aa15.07■□□□□ 0
CUX1-213ENST00000549414 MGAT4CQ9UBM8 478 aa15.07■□□□□ 0
CUX1-213ENST00000549414 PIKFYVEQ9Y2I7 2098 aa15.07■□□□□ 0
CUX1-213ENST00000549414 I3L521 148 aa15.07■□□□□ 0
CUX1-213ENST00000549414 ZNF208O43345 1280 aa15.07■□□□□ 0
CUX1-213ENST00000549414 CTNSO60931 367 aa15.07■□□□□ 0
CUX1-213ENST00000549414 GPX5O75715 221 aa15.07■□□□□ 0
CUX1-213ENST00000549414 KDM4BO94953 1096 aa15.07■□□□□ 0
CUX1-213ENST00000549414 NID1P14543 1247 aa15.07■□□□□ 0
CUX1-213ENST00000549414 P2RY14Q15391 338 aa15.07■□□□□ 0
CUX1-213ENST00000549414 NXNL2Q5VZ03 156 aa15.07■□□□□ 0
CUX1-213ENST00000549414 PYHIN1Q6K0P9 492 aa15.07■□□□□ 0
CUX1-213ENST00000549414 RASD2Q96D21 266 aa15.07■□□□□ 0
CUX1-213ENST00000549414 PGAM5Q96HS1 289 aa15.07■□□□□ 0
CUX1-213ENST00000549414 SLC6A7Q99884 636 aa15.07■□□□□ 0
CUX1-213ENST00000549414 INIPQ9NRY2 104 aa15.07■□□□□ 0
CUX1-213ENST00000549414 SCP2D1Q9UJQ7 156 aa15.07■□□□□ 0
CUX1-213ENST00000549414 C19orf53Q9UNZ5 99 aaPredicted RBP15.07■□□□□ 0
CUX1-213ENST00000549414 ZFC3H1O60293 1989 aaKnown RBP15.07■□□□□ 0
CUX1-213ENST00000549414 MIA3Q5JRA6 1907 aa15.07■□□□□ 0
CUX1-213ENST00000549414 ZNF43P17038 809 aa15.07■□□□□ 0
CUX1-213ENST00000549414 TGM4P49221 684 aa15.07■□□□□ 0
CUX1-213ENST00000549414 TSSK4Q6SA08 328 aa15.07■□□□□ 0
CUX1-213ENST00000549414 LRRN1Q6UXK5 716 aa15.07■□□□□ 0
CUX1-213ENST00000549414 USP51Q70EK9 711 aa15.07■□□□□ 0
CUX1-213ENST00000549414 ETFBKMTQ8IXQ9 262 aa15.07■□□□□ 0
CUX1-213ENST00000549414 RNF113BQ8IZP6 322 aaKnown RBP15.07■□□□□ 0
CUX1-213ENST00000549414 ZG16BQ96DA0 208 aa15.07■□□□□ 0
CUX1-213ENST00000549414 METTL8Q9H825 291 aaKnown RBP15.07■□□□□ 0
CUX1-213ENST00000549414 WSB2Q9NYS7 404 aaPredicted RBP15.07■□□□□ 0
CUX1-213ENST00000549414 BDP1A6H8Y1 2624 aa15.06■□□□□ 0
CUX1-213ENST00000549414 MAGEB4O15481 346 aaPredicted RBP15.06■□□□□ 0
CUX1-213ENST00000549414 NR2C1P13056 603 aa15.06■□□□□ 0
CUX1-213ENST00000549414 HYAL1Q12794 435 aa15.06■□□□□ 0
CUX1-213ENST00000549414 VASNQ6EMK4 673 aa15.06■□□□□ 0
CUX1-213ENST00000549414 Q6ZNX1 250 aa15.06■□□□□ 0
CUX1-213ENST00000549414 DPY19L4Q7Z388 723 aa15.06■□□□□ 0
CUX1-213ENST00000549414 DNAJC5GQ8N7S2 189 aa15.06■□□□□ 0
CUX1-213ENST00000549414 Q96M85 177 aa15.06■□□□□ 0
CUX1-213ENST00000549414 TRBV11-1A0A0K0K1C0 115 aa15.06■□□□□ 0
CUX1-213ENST00000549414 AGAP14A8MT82 685 aa15.06■□□□□ 0
CUX1-213ENST00000549414 GSTT2P0CG29 244 aa15.06■□□□□ 0
CUX1-213ENST00000549414 SLC6A8P48029 635 aa15.06■□□□□ 0
CUX1-213ENST00000549414 PTH2RP49190 550 aa15.06■□□□□ 0
CUX1-213ENST00000549414 SNRPGP62308 76 aaKnown RBP15.06■□□□□ 0
CUX1-213ENST00000549414 POU3F1Q03052 451 aaPredicted RBP15.06■□□□□ 0
CUX1-213ENST00000549414 ZNF584Q8IVC4 421 aa15.06■□□□□ 0
CUX1-213ENST00000549414 PHC2Q8IXK0 858 aa15.06■□□□□ 0
CUX1-213ENST00000549414 GPR148Q8TDV2 347 aa15.06■□□□□ 0
CUX1-213ENST00000549414 GAREM1Q9H706 876 aa15.06■□□□□ 0
CUX1-213ENST00000549414 SLC17A4Q9Y2C5 497 aa15.06■□□□□ 0
CUX1-213ENST00000549414 ACACAQ13085 2346 aa15.06■□□□□ 0
CUX1-213ENST00000549414 TSPAN11A1L157 253 aa15.06■□□□□ 0
CUX1-213ENST00000549414 WRBO00258 174 aa15.06■□□□□ 0
CUX1-213ENST00000549414 RAB11BQ15907 218 aa15.06■□□□□ 0
CUX1-213ENST00000549414 KDM8Q8N371 416 aa15.06■□□□□ 0
CUX1-213ENST00000549414 BBS1Q8NFJ9 593 aa15.06■□□□□ 0
CUX1-213ENST00000549414 FAM71F1Q96KD3 344 aaPredicted RBP15.06■□□□□ 0
CUX1-213ENST00000549414 ALG12Q9BV10 488 aa15.06■□□□□ 0
CUX1-213ENST00000549414 KLHL9Q9P2J3 617 aa15.06■□□□□ 0
CUX1-213ENST00000549414 HS3ST3A1Q9Y663 406 aa15.06■□□□□ 0
CUX1-213ENST00000549414 HTR3EA5X5Y0 456 aa15.06■□□□□ 0
CUX1-213ENST00000549414 HCRTR1O43613 425 aa15.06■□□□□ 0
CUX1-213ENST00000549414 CFL1P23528 166 aaKnown RBP15.06■□□□□ 0
CUX1-213ENST00000549414 CBX5P45973 191 aa15.06■□□□□ 0
CUX1-213ENST00000549414 HCCSP53701 268 aa15.06■□□□□ 0
CUX1-213ENST00000549414 CDNFQ49AH0 187 aa15.06■□□□□ 0
CUX1-213ENST00000549414 POGLUT1Q8NBL1 392 aa15.06■□□□□ 0
CUX1-213ENST00000549414 ZNF775Q96BV0 537 aaPredicted RBP15.06■□□□□ 0
CUX1-213ENST00000549414 RBM24Q9BX46 236 aaKnown RBP15.06■□□□□ 0
CUX1-213ENST00000549414 CD1CP29017 333 aa15.05■□□□□ 0
CUX1-213ENST00000549414 GFERP55789 205 aa15.05■□□□□ 0
CUX1-213ENST00000549414 CTBP2P56545 445 aa15.05■□□□□ 0
CUX1-213ENST00000549414 ADGRF3Q8IZF5 1079 aa15.05■□□□□ 0
CUX1-213ENST00000549414 DUSP22Q9NRW4 184 aa15.05■□□□□ 0
CUX1-213ENST00000549414 GSKIPQ9P0R6 139 aa15.05■□□□□ 0
CUX1-213ENST00000549414 ADAM18Q9Y3Q7 739 aa15.05■□□□□ 0
CUX1-213ENST00000549414 PLXNA1Q9UIW2 1896 aa15.05■□□□□ 0
CUX1-213ENST00000549414 OR2AT4A6NND4 320 aa15.05■□□□□ -0
CUX1-213ENST00000549414 OR2T1O43869 369 aa15.05■□□□□ -0
CUX1-213ENST00000549414 MYF5P13349 255 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms