RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CCNA2P20248 432 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 FKBP2P26885 142 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 EPHA3P29320 983 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 ACVR1BP36896 505 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 HTR3AP46098 478 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 POLR2HP52434 150 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 WDR4P57081 412 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 H3F3AP84243 136 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 PPP2R2BQ00005 443 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 SPOCK1Q08629 439 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 MAPK11Q15759 364 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 COX20Q5RI15 118 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 MRPL2Q5T653 305 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 LRRC74BQ6ZQY2 392 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 DNM1P46Q6ZS02 220 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 SPATA19Q7Z5L4 167 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 CCDC103Q8IW40 242 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 UBE2J2Q8N2K1 259 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 ANKRD42Q8N9B4 389 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 MAPK1IP1LQ8NDC0 245 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 PNPT1Q8TCS8 783 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 OR52E6Q96RD3 313 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 PAIP2Q9BPZ3 127 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 GRIP2Q9C0E4 1043 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 WDR55Q9H6Y2 383 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 TAS2R16Q9NYV7 291 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 CISD1Q9NZ45 108 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 TMEM181Q9P2C4 612 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 OSGIN1Q9UJX0 560 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 TMED7-TICAM2A0A0A6YYA0 188 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 KIAA1324LA8MWY0 1029 aaPredicted RBP15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 PDLIM1O00151 329 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 HDAC3O15379 428 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 ZNF208O43345 1280 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 NDUFS7O75251 213 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 GSNP06396 782 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 ITGA5P08648 1049 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 IMPDH2P12268 514 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 TACR3P29371 465 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 IDUAP35475 653 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 ANXA11P50995 505 aaKnown RBP15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 MVDP53602 400 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 FOXG1P55316 489 aaPredicted RBP15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 OR2B6P58173 313 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 LRRC74AQ0VAA2 488 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 EPS8Q12929 822 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 OR52N5Q8NH56 324 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 SLC6A13Q9NSD5 602 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 ASB6Q9NWX5 421 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 TRAPPC4Q9Y296 219 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 TMED7Q9Y3B3 224 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 SLC25A15Q9Y619 301 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 DSPPQ9NZW4 1301 aa15.31■□□□□ 0.04
CHMP1A-205ENST00000548650 ATRQ13535 2644 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 TMEM120BA0PK00 339 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 ZC3H12DA2A288 527 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 MRPL33O75394 65 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 SLC1A3P43003 542 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 MAGEA8P43361 318 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 DMTNQ08495 405 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 HHATQ5VTY9 493 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 TMEM108Q6UXF1 575 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 CASP12Q6UXS9 341 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 ZNF621Q6ZSS3 439 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 OR52E4Q8NGH9 312 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 DDIT4LQ96D03 193 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 AMBRA1Q9C0C7 1298 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 ALG2Q9H553 416 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 FAIMQ9NVQ4 179 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 GDF2Q9UK05 429 aaPredicted RBP15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 ADAM21Q9UKJ8 722 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 SLC9A8Q9Y2E8 581 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 FLVCR1Q9Y5Y0 555 aa15.3■□□□□ 0.04
CHMP1A-205ENST00000548650 A0A1W2PR80 420 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 CIB4A0PJX0 185 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 CFAP73A6NFT4 308 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 CCT8L1PA6NM43 557 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 DBIP07108 87 aaKnown RBP15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 NR2F1P10589 423 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 ZNF83P51522 516 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 SLC35A1P78382 337 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 GNA13Q14344 377 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 GABRA6Q16445 453 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 PDCD4Q53EL6 469 aaKnown RBP15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 C11orf71Q6IPW1 123 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 B3GLCTQ6Y288 498 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 CROCCP2Q86T23 111 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 PIAS4Q8N2W9 510 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 GLB1L3Q8NCI6 653 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 PMM1Q92871 262 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 RADILQ96JH8 1075 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 MAELQ96JY0 434 aaKnown RBP15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 ZBTB18Q99592 522 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 REG4Q9BYZ8 158 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 THAP1Q9NVV9 213 aa15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 HEATR1Q9H583 2144 aaKnown RBP15.29■□□□□ 0.04
CHMP1A-205ENST00000548650 CDHR4A6H8M9 788 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 TRPC5OSA6NMA1 111 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 E7EQL1 145 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 RFXANKO14593 260 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms