RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 C9orf135Q5VTT2 229 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 DNAJC14Q6Y2X3 702 aaPredicted RBP12.61□□□□□ -0.39
TROAP-203ENST00000546735 LRRC74BQ6ZQY2 392 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
TROAP-203ENST00000546735 OR52E4Q8NGH9 312 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 WDR60Q8WVS4 1066 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 TRNT1Q96Q11 434 aaKnown RBP12.61□□□□□ -0.39
TROAP-203ENST00000546735 SLCO5A1Q9H2Y9 848 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 SLC6A13Q9NSD5 602 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 TMEM181Q9P2C4 612 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 OSGIN1Q9UJX0 560 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 ABCA2Q9BZC7 2435 aa12.61□□□□□ -0.39
TROAP-203ENST00000546735 ZC3H12DA2A288 527 aaKnown RBP12.6□□□□□ -0.39
TROAP-203ENST00000546735 MRPL33O75394 65 aaKnown RBP12.6□□□□□ -0.39
TROAP-203ENST00000546735 NR2F1P10589 423 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 IL7RP16871 459 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 MAPK11Q15759 364 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 MRPL2Q5T653 305 aaKnown RBP12.6□□□□□ -0.39
TROAP-203ENST00000546735 NXNQ6DKJ4 435 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 SPATA19Q7Z5L4 167 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 KIRREL3Q8IZU9 778 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 TRIML2Q8N7C3 387 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 PIGXQ8TBF5 258 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 C1QTNF6Q9BXI9 259 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 RLIMQ9NVW2 624 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 ADAM21Q9UKJ8 722 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 RAB21Q9UL25 225 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 SLC25A15Q9Y619 301 aa12.6□□□□□ -0.39
TROAP-203ENST00000546735 CSPG4Q6UVK1 2322 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 TMEM120BA0PK00 339 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 E7EQL1 145 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 GPR171O14626 319 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 SNNO75324 88 aaPredicted RBP12.59□□□□□ -0.39
TROAP-203ENST00000546735 GKN3PP0CG01 181 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 RPS4Y1P22090 263 aaKnown RBP12.59□□□□□ -0.39
TROAP-203ENST00000546735 MAGEA8P43361 318 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 CLK1P49759 484 aaKnown RBP12.59□□□□□ -0.39
TROAP-203ENST00000546735 POLR2HP52434 150 aaKnown RBP12.59□□□□□ -0.39
TROAP-203ENST00000546735 SLC16A1P53985 500 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 H3F3AP84243 136 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 EPS8Q12929 822 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 GABRA6Q16445 453 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 SLC9B1Q4ZJI4 515 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 CASP12Q6UXS9 341 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 P2RY8Q86VZ1 359 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 VRK2Q86Y07 508 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 CMIPQ8IY22 773 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 DDIT4LQ96D03 193 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 ZBTB18Q99592 522 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 MDFIQ99750 246 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 REG4Q9BYZ8 158 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 ALG2Q9H553 416 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 MTHFD2LQ9H903 347 aaPredicted RBP12.59□□□□□ -0.39
TROAP-203ENST00000546735 ASB6Q9NWX5 421 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 TRAPPC4Q9Y296 219 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 B3GALT5Q9Y2C3 310 aa12.59□□□□□ -0.39
TROAP-203ENST00000546735 CFAP73A6NFT4 308 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 M0R1B8 84 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 RFXANKO14593 260 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 HDAC3O15379 428 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 ZNF208O43345 1280 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 DNPH1O43598 174 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 DBIP07108 87 aaKnown RBP12.58□□□□□ -0.4
TROAP-203ENST00000546735 THBS1P07996 1170 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 ITGA5P08648 1049 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 ETFAP13804 333 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 FKBP2P26885 142 aaKnown RBP12.58□□□□□ -0.4
TROAP-203ENST00000546735 SLC1A3P43003 542 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 HTR3AP46098 478 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 ANXA11P50995 505 aaKnown RBP12.58□□□□□ -0.4
TROAP-203ENST00000546735 MVDP53602 400 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 SLC35A1P78382 337 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 GTDC1Q4AE62 458 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 TSPO2Q5TGU0 170 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 SLC22A25Q6T423 547 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 B3GLCTQ6Y288 498 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 ZNF836Q6ZNA1 936 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 DTX2Q86UW9 622 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 HS6ST2Q96MM7 605 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 SLC7A10Q9NS82 523 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 THAP1Q9NVV9 213 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 TAS2R16Q9NYV7 291 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 MALT1Q9UDY8 824 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 POU2F3Q9UKI9 436 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 FLVCR1Q9Y5Y0 555 aa12.58□□□□□ -0.4
TROAP-203ENST00000546735 TRPC5OSA6NMA1 111 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 SSX4O60224 188 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 SLC22A3O75751 556 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 KRT75O95678 551 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 BCHEP06276 602 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 CD40P25942 277 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 SLC25A3Q00325 362 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 DMTNQ08495 405 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 BNIP2Q12982 314 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 CEACAM7Q14002 265 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 GNA13Q14344 377 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 SLC17A1Q14916 467 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 OR7A5Q15622 319 aa12.57□□□□□ -0.4
TROAP-203ENST00000546735 ETFDHQ16134 617 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms