RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 STK11Q15831 433 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 ETFDHQ16134 617 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 SLC9B1Q4ZJI4 515 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 COX20Q5RI15 118 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 C6orf10Q5SRN2 563 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 BEND6Q5SZJ8 279 aaPredicted RBP8.28□□□□□ -1.08
YBX3-218ENST00000546298 MRPL2Q5T653 305 aaKnown RBP8.28□□□□□ -1.08
YBX3-218ENST00000546298 C1QTNF12Q5T7M4 302 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 OR7E24Q6IFN5 339 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 HMGN2P46Q86SG4 172 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 MIER2Q8N344 545 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 OR52P1PQ8NH57 321 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 PNPT1Q8TCS8 783 aaKnown RBP8.28□□□□□ -1.08
YBX3-218ENST00000546298 IGFBPL1Q8WX77 278 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 GTPBP3Q969Y2 492 aaKnown RBP8.28□□□□□ -1.08
YBX3-218ENST00000546298 MS4A3Q96HJ5 214 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 RADILQ96JH8 1075 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 OR11A1Q9GZK7 315 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 FAIMQ9NVQ4 179 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 ASB6Q9NWX5 421 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 SLC9A8Q9Y2E8 581 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 IFT52Q9Y366 437 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 A0A096LPI6 279 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 A0A0G2JPF8 293 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 TMEM72A0PK05 275 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 FAM234BA2RU67 622 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 CDHR4A6H8M9 788 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 DPRXA6NFQ7 191 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 OR5H1A6NKK0 313 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 HNRNPCL2B2RXH8 293 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 HNRNPCL3B7ZW38 293 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 AP3D1O14617 1153 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 SMAD7O15105 426 aaKnown RBP8.27□□□□□ -1.09
YBX3-218ENST00000546298 HNRNPCL1O60812 293 aaKnown RBP8.27□□□□□ -1.09
YBX3-218ENST00000546298 TGDSO95455 350 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 GPIP06744 558 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 TFPTP0C1Z6 253 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 HNRNPCL4P0DMR1 293 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 COX5AP20674 150 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 IDUAP35475 653 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 H3F3AP84243 136 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 TGFBR3Q03167 851 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 BSPH1Q075Z2 132 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 ZNF672Q499Z4 452 aaPredicted RBP8.27□□□□□ -1.09
YBX3-218ENST00000546298 AGBL2Q5U5Z8 902 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 PRAMEF8Q5VWM4 474 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 PRAMEF7Q5VXH5 474 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 WBP2NLQ6ICG8 309 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 PAQR6Q6TCH4 344 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 KLHL17Q6TDP4 642 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 TMEM108Q6UXF1 575 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 CCDC103Q8IW40 242 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 ZNF433Q8N7K0 673 aaPredicted RBP8.27□□□□□ -1.09
YBX3-218ENST00000546298 SMAP2Q8WU79 429 aaPredicted RBP8.27□□□□□ -1.09
YBX3-218ENST00000546298 C7orf26Q96N11 449 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 SF3B5Q9BWJ5 86 aaKnown RBP8.27□□□□□ -1.09
YBX3-218ENST00000546298 SPATA9Q9BWV2 254 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 TAPBPLQ9BX59 468 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 ADAM19Q9H013 955 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 ALG2Q9H553 416 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 PIF1Q9H611 641 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 TAS2R16Q9NYV7 291 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 UPB1Q9UBR1 384 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 MALT1Q9UDY8 824 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 MGAT4BQ9UQ53 548 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 USH1CQ9Y6N9 552 aa8.27□□□□□ -1.09
YBX3-218ENST00000546298 A8MVM7 634 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 C5orf58C9J3I9 102 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 OVOL3O00110 214 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 POLR3GO15318 223 aaPredicted RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 ADAM11O75078 769 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 RAD51DO75771 328 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 LY6G6DO95868 133 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 IGHV3-9P01782 118 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 C1QCP02747 245 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 BCHEP06276 602 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 THBS1P07996 1170 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 DANCRP0C864 163 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 ETFAP13804 333 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 NCF2P19878 526 aaPredicted RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 PTAFRP25105 342 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 MRPL19P49406 292 aaKnown RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 MVDP53602 400 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 IRX1P78414 480 aaPredicted RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 PLAURQ03405 335 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 FAPQ12884 760 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 FADDQ13158 208 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 RNF220Q5VTB9 566 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 EPGNQ6UW88 154 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 CASP12Q6UXS9 341 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 ZNF836Q6ZNA1 936 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 Q71RC1 249 aaPredicted RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 ABHD12BQ7Z5M8 362 aaPredicted RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 VRK2Q86Y07 508 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 DEPDC4Q8N2C3 294 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 CADM2Q8N3J6 435 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 LILRB1Q8NHL6 650 aaPredicted RBP8.26□□□□□ -1.09
YBX3-218ENST00000546298 LRRC8CQ8TDW0 803 aa8.26□□□□□ -1.09
YBX3-218ENST00000546298 SLC38A5Q8WUX1 472 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms