RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ETFDHQ16134 617 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 TMEM69Q5SWH9 247 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 MFSD12Q6NUT3 480 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 NUDT18Q6ZVK8 323 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 OR51A7Q8NH64 312 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 C1orf216Q8TAB5 229 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 ZNF681Q96N22 645 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 MS4A4EQ96PG1 132 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 SLC25A18Q9H1K4 315 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 C6orf106Q9H6K1 298 aaPredicted RBP13.11□□□□□ -0.31
SRP54-202ENST00000546080 NOX4Q9NPH5 578 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 PCDHB16Q9NRJ7 776 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 LRRK1Q38SD2 2015 aa13.11□□□□□ -0.31
SRP54-202ENST00000546080 IFITM5A6NNB3 132 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 NDUFB6O95139 128 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 C8AP07357 584 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 SRMP19623 302 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 DCTDP32321 178 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 CCR2P41597 374 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 DLX5P56178 289 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 MRPS10P82664 201 aaKnown RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 RPL22L1Q6P5R6 122 aaKnown RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 ZC3H14Q6PJT7 736 aaKnown RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 TMPRSS11FQ6ZWK6 438 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 DEFB128Q7Z7B8 93 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 SYS1Q8N2H4 156 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 ARL14Q8N4G2 192 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 ZNF433Q8N7K0 673 aaPredicted RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 OR2L5Q8NG80 312 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 OR52B4Q8NGK2 314 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 SNX33Q8WV41 574 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 PNPLA2Q96AD5 504 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 ARRDC3Q96B67 414 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 ZMYND19Q96E35 227 aaPredicted RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 S100A16Q96FQ6 103 aaKnown RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 FERD3LQ96RJ6 166 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 PDCD1LG2Q9BQ51 273 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 UTP23Q9BRU9 249 aaKnown RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 XKR8Q9H6D3 395 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 GPR160Q9UJ42 338 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 GNG8Q9UK08 70 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 MED31Q9Y3C7 131 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 TBC1D3EA0A087X179 549 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 TBC1D3KA0A087X1G2 549 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 TBC1D3BA6NDS4 549 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 TBC1D3FA6NER0 549 aaPredicted RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 D6RAR5 112 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 SDC3O75056 442 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 IFNGP01579 166 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 APOC3P02656 99 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 THBS1P07996 1170 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 HOXB3P14651 431 aaPredicted RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 RAB3AP20336 220 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 DPP4P27487 766 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 PTH2RP49190 550 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 P2RX1P51575 399 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 STX4Q12846 297 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 DUSP8Q13202 625 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 KRT33BQ14525 404 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 ZNF169Q14929 603 aaPredicted RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 CEBPEQ15744 281 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 ARHGAP11BQ3KRB8 267 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 METRNLQ641Q3 311 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 TBC1D3GQ6DHY5 549 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 CDH26Q8IXH8 852 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 LINC00518Q8N0U6 118 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 EIF4E3Q8N5X7 224 aaKnown RBP13.1□□□□□ -0.31
SRP54-202ENST00000546080 OR7G2Q8NG99 324 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 SYNPRQ8TBG9 265 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 COL26A1Q96A83 441 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 ORAI1Q96D31 301 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 OR1F2PQ96R84 312 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 MCCC2Q9HCC0 563 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 POT1Q9NUX5 634 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 OPN4Q9UHM6 478 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 FOXJ3Q9UPW0 622 aa13.1□□□□□ -0.31
SRP54-202ENST00000546080 ACOT7O00154 380 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 CCL16O15467 120 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 KDM4BO94953 1096 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 SIX6O95475 246 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 LDOC1O95751 146 aaPredicted RBP13.09□□□□□ -0.31
SRP54-202ENST00000546080 OR2T7P0C7T2 308 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 NAA10P41227 235 aaPredicted RBP13.09□□□□□ -0.31
SRP54-202ENST00000546080 MECP2P51608 486 aaKnown RBP13.09□□□□□ -0.31
SRP54-202ENST00000546080 CLDN12P56749 244 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 AMZ1Q400G9 498 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 C17orf107Q6ZR85 190 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 DGLUCYQ7Z3D6 616 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 NRROSQ86YC3 692 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 ZNF784Q8NCA9 323 aaPredicted RBP13.09□□□□□ -0.31
SRP54-202ENST00000546080 OR5M1Q8NGP8 315 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 OR2A1Q8NGT9 310 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 OR2T27Q8NH04 317 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 PAWRQ96IZ0 340 aaKnown RBP13.09□□□□□ -0.31
SRP54-202ENST00000546080 CNN2Q99439 309 aaKnown RBP13.09□□□□□ -0.31
SRP54-202ENST00000546080 GFI1Q99684 422 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 MRPS30Q9NP92 439 aaKnown RBP13.09□□□□□ -0.31
SRP54-202ENST00000546080 HCFC1R1Q9NWW0 138 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 RNF186Q9NXI6 227 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 WNT6Q9Y6F9 365 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms