RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 LEXMQ3ZCV2 418 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 AKR1C8PQ5T2L2 129 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 FAM71F1Q96KD3 344 aaPredicted RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SFXN2Q96NB2 322 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 AMBRA1Q9C0C7 1298 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 C1GALT1Q9NS00 363 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 RBFOX1Q9NWB1 397 aaKnown RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 LOC102723532A0A0G2JNH3 316 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 UBL3O95164 117 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 PLATP00750 562 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 TAS2R46P59540 309 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SIRPAP78324 504 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 GPR176Q14439 515 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SAXO2Q658L1 398 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 OPN5Q6U736 354 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SMAP2Q8WU79 429 aaPredicted RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 TSPAN15O95858 294 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 HMGA1P17096 107 aaKnown RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 OTX2P32243 289 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 MRPL58Q14197 206 aaKnown RBP11.66□□□□□ -0.54
COL4A6-209ENST00000545689 OR2G6Q5TZ20 316 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 Q6ZNX1 250 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 SH2D5Q6ZV89 423 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 EID2Q8N6I1 236 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 FNDC9Q8TBE3 224 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 ZBTB8AQ96BR9 441 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 LRFN5Q96NI6 719 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 ADOQ96SZ5 270 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 GABARAPL3Q9BY60 117 aa11.66□□□□□ -0.54
COL4A6-209ENST00000545689 CPNE6O95741 557 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 IGHEP01854 428 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 MT-ND4P03905 459 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 SLC6A12P48065 614 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 RBMS2Q15434 407 aaKnown RBP11.65□□□□□ -0.54
COL4A6-209ENST00000545689 NKPD1Q17RQ9 610 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 ABHD17CQ6PCB6 329 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF695Q8IW36 515 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 OR52I1Q8NGK6 324 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 ZFPM2Q8WW38 1151 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 C16orf58Q96GQ5 468 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 ELOVL3Q9HB03 270 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 EMC3Q9P0I2 261 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 HCSTQ9UBK5 93 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 A6NLC8 198 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF195O14628 629 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 APLNRP35414 380 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 CSNK1G2P78368 415 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 MPEG1Q2M385 716 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 DHRS4L2Q6PKH6 230 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 MRPL21Q7Z2W9 205 aaKnown RBP11.65□□□□□ -0.54
COL4A6-209ENST00000545689 PLCXD1Q9NUJ7 323 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 TRAV36DV7A0A075B6V5 113 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 PEX14O75381 377 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 IRF2P14316 349 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 AKR1C2P52895 323 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 DPTQ07507 201 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 DUSP7Q16829 419 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 COX20Q5RI15 118 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 TSSK4Q6SA08 328 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 Q6ZPB1 254 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-209ENST00000545689 MEX3DQ86XN8 651 aaKnown RBP11.65□□□□□ -0.54
COL4A6-209ENST00000545689 OR1J4Q8NGS1 313 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 OR51Q1Q8NH59 317 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 SLC41A2Q96JW4 573 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 SIDT1Q9NXL6 827 aaKnown RBP11.65□□□□□ -0.54
COL4A6-209ENST00000545689 GMPR2Q9P2T1 348 aaKnown RBP11.65□□□□□ -0.54
COL4A6-209ENST00000545689 HS3ST3A1Q9Y663 406 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 TMEM269A0A1B0GVZ9 245 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 FAM183AA6NL82 134 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 H3BML4 177 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 DUSP6Q16828 381 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 GDF7Q7Z4P5 450 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 OR4M1Q8NGD0 313 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 MYLIPQ8WY64 445 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF566Q969W8 418 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 SEMA6CQ9H3T2 930 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 ADAM18Q9Y3Q7 739 aa11.65□□□□□ -0.54
COL4A6-209ENST00000545689 TRIM64A6NGJ6 449 aa11.65□□□□□ -0.55
COL4A6-209ENST00000545689 TVP23AA6NH52 213 aa11.65□□□□□ -0.55
COL4A6-209ENST00000545689 GAAP10253 952 aa11.65□□□□□ -0.55
COL4A6-209ENST00000545689 YIF1BQ5BJH7 314 aa11.65□□□□□ -0.55
COL4A6-209ENST00000545689 RPL3LQ92901 407 aaKnown RBP11.65□□□□□ -0.55
COL4A6-209ENST00000545689 MCTS1Q9ULC4 181 aaKnown RBP11.65□□□□□ -0.55
COL4A6-209ENST00000545689 LAMB2P55268 1798 aa11.65□□□□□ -0.55
COL4A6-209ENST00000545689 A0A0D9SG52 128 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 ARRDC5A6NEK1 342 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 SULT1B1O43704 296 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 TRAPPC2P0DI81 140 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 TRAPPC2BP0DI82 140 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 Q499Y3 187 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 MFSD12Q6NUT3 480 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 RFPL4BQ6ZWI9 263 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 LIX1LQ8IVB5 337 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 IL17RDQ8NFM7 739 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 OR14K1Q8NGZ2 314 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 SLC46A1Q96NT5 459 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 WDR76Q9H967 626 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 A0A0A6YYH2 397 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 A6NJ64 397 aa11.64□□□□□ -0.55
COL4A6-209ENST00000545689 FASLGP48023 281 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms