RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 MCOLN1Q9GZU1 580 aa7.96□□□□□ -1.13
ABCB1-210ENST00000543898 TM7SF3Q9NS93 570 aa7.96□□□□□ -1.13
ABCB1-210ENST00000543898 ASF1BQ9NVP2 202 aa7.96□□□□□ -1.13
ABCB1-210ENST00000543898 IER3IP1Q9Y5U9 82 aa7.96□□□□□ -1.13
ABCB1-210ENST00000543898 SIRT4Q9Y6E7 314 aaPredicted RBP7.96□□□□□ -1.13
ABCB1-210ENST00000543898 KDM4EB2RXH2 506 aaPredicted RBP7.96□□□□□ -1.14
ABCB1-210ENST00000543898 WRBO00258 174 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 PRICKLE3O43900 615 aaPredicted RBP7.96□□□□□ -1.14
ABCB1-210ENST00000543898 PPP3CBP16298 524 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 CMPK1P30085 196 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 GABRA3P34903 492 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 TRHRP34981 398 aaPredicted RBP7.96□□□□□ -1.14
ABCB1-210ENST00000543898 SEC61A1P61619 476 aaKnown RBP7.96□□□□□ -1.14
ABCB1-210ENST00000543898 ZNHIT3Q15649 155 aaPredicted RBP7.96□□□□□ -1.14
ABCB1-210ENST00000543898 MAPK14Q16539 360 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 TMEM88Q6PEY1 159 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 NHLRC1Q6VVB1 395 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 ZNF546Q86UE3 836 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 PARGQ86W56 976 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 TEX19Q8NA77 164 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 COMMD4Q9H0A8 199 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 FN3KQ9H479 309 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 NPFFR2Q9Y5X5 522 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 V9GY05 133 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 DSPPQ9NZW4 1301 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 GREB1Q4ZG55 1949 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 NPIPB8E9PQR5 432 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 ADAMTS4O75173 837 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 PPM1BO75688 479 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 PAK4O96013 591 aaPredicted RBP7.96□□□□□ -1.14
ABCB1-210ENST00000543898 POU3F2P20265 443 aaPredicted RBP7.96□□□□□ -1.14
ABCB1-210ENST00000543898 DCTDP32321 178 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 C21orf58P58505 322 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 SREBF2Q12772 1141 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 AGERQ15109 404 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 NNATQ16517 81 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 YOD1Q5VVQ6 348 aaPredicted RBP7.96□□□□□ -1.14
ABCB1-210ENST00000543898 SCARB1Q8WTV0 552 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 CCDC107Q8WV48 283 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 YIPF5Q969M3 257 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 SEC22AQ96IW7 307 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 TNFRSF13CQ96RJ3 184 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 LMF1Q96S06 567 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 KXD1Q9BQD3 176 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 SPHK2Q9NRA0 654 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 MED17Q9NVC6 651 aa7.96□□□□□ -1.14
ABCB1-210ENST00000543898 DICER1Q9UPY3 1922 aaKnown RBP7.96□□□□□ -1.14
ABCB1-210ENST00000543898 SERTM1A2A2V5 107 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 NAP1L6A6NFF2 107 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 OR52A4PA6NMU1 304 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 SEMA7AO75326 666 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 SBK2P0C263 348 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 SLC35G6P0C7Q6 338 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 BSGP35613 385 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 MAGEB1P43366 347 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 SIRPAP78324 504 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 MFSD13AQ14CX5 517 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.95□□□□□ -1.144e-6■□□□□ 9.4
ABCB1-210ENST00000543898 HTR3DQ70Z44 454 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 OR2T4Q8NH00 348 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 NANPQ8TBE9 248 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 DVL3Q92997 716 aaPredicted RBP7.95□□□□□ -1.14
ABCB1-210ENST00000543898 ATG5Q9H1Y0 275 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 ZNF768Q9H5H4 540 aaKnown RBP7.95□□□□□ -1.14
ABCB1-210ENST00000543898 LIN7BQ9HAP6 207 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 MKKSQ9NPJ1 570 aaPredicted RBP7.95□□□□□ -1.14
ABCB1-210ENST00000543898 HCFC1R1Q9NWW0 138 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 UPB1Q9UBR1 384 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 FBXL4Q9UKA2 621 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 CACNA1IQ9P0X4 2223 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 ACOT7O00154 380 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 LCMT2O60294 686 aaKnown RBP7.95□□□□□ -1.14
ABCB1-210ENST00000543898 AIFM1O95831 613 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 HIST1H2ABP04908 130 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 IFNA6P05013 189 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 HIST1H1TP22492 207 aaPredicted RBP7.95□□□□□ -1.14
ABCB1-210ENST00000543898 ITPKBP27987 946 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 GNALP38405 381 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 RGS19P49795 217 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 OR1Q1Q15612 314 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 DECR1Q16698 335 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 AADACL4Q5VUY2 407 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 NIPAL3Q6P499 406 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 HIST3H2AQ7L7L0 130 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 SLC35F2Q8IXU6 374 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 OR4K14Q8NGD5 310 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 THAP6Q8TBB0 222 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 HIST1H2ACQ93077 130 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 SGPP1Q9BX95 441 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 HMX1Q9NP08 348 aaPredicted RBP7.95□□□□□ -1.14
ABCB1-210ENST00000543898 OR2S2Q9NQN1 319 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 ACTR10Q9NZ32 417 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 ZNF443Q9Y2A4 671 aaPredicted RBP7.95□□□□□ -1.14
ABCB1-210ENST00000543898 SLC35A3Q9Y2D2 325 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 OR1A2Q9Y585 309 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 MYO16Q9Y6X6 1858 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 DOCK4Q8N1I0 1966 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 C1QTNF3-AMACRE9PGA6 284 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 F8W036 122 aa7.95□□□□□ -1.14
ABCB1-210ENST00000543898 PRAMEF2O60811 474 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms