RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 RPS3AP61247 264 aaKnown RBP10.73□□□□□ -0.69
DDB1-223ENST00000543658 SLC34A1Q06495 639 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 RIPK1Q13546 671 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 TRIP10Q15642 601 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 MICAQ29983 383 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 TMEM44Q2T9K0 475 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 TMEM176BQ3YBM2 270 aaPredicted RBP10.73□□□□□ -0.69
DDB1-223ENST00000543658 KRTCAP3Q53RY4 240 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 C1orf140Q5VVS0 124 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 ARHGAP11AQ6P4F7 1023 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 SHQ1Q6PI26 577 aaKnown RBP10.73□□□□□ -0.69
DDB1-223ENST00000543658 WDR88Q6ZMY6 472 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 MBOAT2Q6ZWT7 520 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 NRMQ8IXM6 262 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 OR4K5Q8NGD3 323 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 SLC7A13Q8TCU3 470 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 FAR1Q8WVX9 515 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 EME1Q96AY2 570 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 ZHX1-C8orf76Q96EF9 292 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 SGTBQ96EQ0 304 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 NRBF2Q96F24 287 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 KLHL15Q96M94 604 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 GPR137Q96N19 417 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 PRSS27Q9BQR3 290 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 C9orf16Q9BUW7 83 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 NDEL1Q9GZM8 345 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 VCXQ9H320 206 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 TIGARQ9NQ88 270 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 VNN3Q9NY84 501 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 HDGFL3Q9Y3E1 203 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 ZNF337Q9Y3M9 751 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 GTF3C1Q12789 2109 aa10.73□□□□□ -0.69
DDB1-223ENST00000543658 MED12Q93074 2177 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 SVILO95425 2214 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 A0A087WUU8 490 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 SULT2B1O00204 365 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 AQP7O14520 342 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 PIP5K1CO60331 668 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 LYPD3O95274 346 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 HIST1H2ABP04908 130 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 SAGP10523 405 aaPredicted RBP10.72□□□□□ -0.69
DDB1-223ENST00000543658 ANXA8P13928 327 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 BMP7P18075 431 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 IL11P20809 199 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 RPS5P46782 204 aaKnown RBP10.72□□□□□ -0.69
DDB1-223ENST00000543658 HMGA2P52926 109 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 IST1P53990 364 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 B3GALT5-AS1P59052 145 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 CSNK2A1P68400 391 aaPredicted RBP10.72□□□□□ -0.69
DDB1-223ENST00000543658 FOXK1P85037 733 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 SRYQ05066 204 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 RBPJQ06330 500 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 MFSD13AQ14CX5 517 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 SGCBQ16585 318 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 NHSL2Q5HYW2 709 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 OTUD3Q5T2D3 398 aaPredicted RBP10.72□□□□□ -0.69
DDB1-223ENST00000543658 FAM69AQ5T7M9 428 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 WLSQ5T9L3 541 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 PPP4R4Q6NUP7 873 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 LINC00114Q6XXX2 140 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 ESPNLQ6ZVH7 1005 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 HIST3H2AQ7L7L0 130 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 STK32CQ86UX6 486 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 P3H2Q8IVL5 708 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 SIAH3Q8IW03 269 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 PM20D2Q8IYS1 436 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 ATG16L2Q8NAA4 619 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 LSM14AQ8ND56 463 aaKnown RBP10.72□□□□□ -0.69
DDB1-223ENST00000543658 OR9Q2Q8NGE9 314 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 OR4C15Q8NGM1 316 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 PFN4Q8NHR9 129 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 GNPDA2Q8TDQ7 276 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 HIST1H2ACQ93077 130 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 RELTQ969Z4 430 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 ZNF524Q96C55 264 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 SNRNP40Q96DI7 357 aaKnown RBP10.72□□□□□ -0.69
DDB1-223ENST00000543658 DNAJA3Q96EY1 480 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 ASPNQ9BXN1 380 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 POTEKPQ9BYX7 375 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 OR11A1Q9GZK7 315 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 VCX3BQ9H321 246 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 OAZ3Q9UMX2 235 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 MGAT4BQ9UQ53 548 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 CAMK2AQ9UQM7 478 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 ORC6Q9Y5N6 252 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 ARHGAP21Q5T5U3 1957 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 CACNA1BQ00975 2339 aa10.72□□□□□ -0.69
DDB1-223ENST00000543658 A0A1B0GTH9 108 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 A0A1W2PNR3 127 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 ZC3H12DA2A288 527 aaKnown RBP10.71□□□□□ -0.69
DDB1-223ENST00000543658 OR14I1A6ND48 311 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 ARRDC5A6NEK1 342 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 TNFSF11O14788 317 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 BCKDKO14874 412 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 LAMA5O15230 3695 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 CH25HO95992 272 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 MT-ATP6P00846 226 aa10.71□□□□□ -0.69
DDB1-223ENST00000543658 IGF2P01344 180 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms