RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 GMEB1Q9Y692 573 aa11.6□□□□□ -0.55
TNFRSF1A-215ENST00000543359 UQCRHLA0A096LP55 91 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 A0A096LPI6 279 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 A0A0G2JPF8 293 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HNRNPCL2B2RXH8 293 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HNRNPCL3B7ZW38 293 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CLIC1O00299 241 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 POLR3GO15318 223 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HNRNPCL1O60812 293 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PGM3O95394 542 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CNOT4O95628 575 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 BCHEP06276 602 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 GKN3PP0CG01 181 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HNRNPCL4P0DMR1 293 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 TFPIP10646 304 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 FOSL1P15407 271 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CCNA2P20248 432 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 COX5AP20674 150 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 FPR1P21462 350 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 IGHV1-2P23083 117 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 MAP2K6P52564 334 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CRISP3P54108 245 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 AQP5P55064 265 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 NKX6-1P78426 367 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 GNA13Q14344 377 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RPS26P11Q5JNZ5 115 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PAGE3Q5JUK9 113 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 C6orf10Q5SRN2 563 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 RNF220Q5VTB9 566 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZNF704Q6ZNC4 412 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 C20orf204Q6ZNR8 217 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ATG4DQ86TL0 474 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PEX5LQ8IYB4 626 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 LRRC75A-AS1Q8N1F1 130 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 HSD17B8Q92506 261 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 MAL2Q969L2 176 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 PIGTQ969N2 578 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 VIPAS39Q9H9C1 493 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 A4GALTQ9NPC4 353 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 CALML5Q9NZT1 146 aa11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 ZNF443Q9Y2A4 671 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-215ENST00000543359 LYZL6O75951 148 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ANP32DO95626 131 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 THBS1P07996 1170 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PAX1P15863 534 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NR1H2P55055 460 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 OR2B6P58173 313 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PPP2R2AP63151 447 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 FADDQ13158 208 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZSWIM7Q19AV6 140 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 LIN52Q52LA3 116 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NCMAPQ5T1S8 102 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PRAMEF8Q5VWM4 474 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PRAMEF7Q5VXH5 474 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ADAM5Q6NVV9 412 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 BHLHA15Q7RTS1 189 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 HDXQ7Z353 690 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF440Q8IYI8 595 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF433Q8N7K0 673 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CKAP2Q8WWK9 683 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 STON2Q8WXE9 905 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 KISS1RQ969F8 398 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SPDL1Q96EA4 605 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 USB1Q9BQ65 265 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SPATA9Q9BWV2 254 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 POTEKPQ9BYX7 375 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GSX1Q9H4S2 264 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 IKZF5Q9H5V7 419 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 TMEM45AQ9NWC5 275 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 THUMPD1Q9NXG2 353 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 VAPAQ9P0L0 249 aa11.58□□□□□ -0.56
TNFRSF1A-215ENST00000543359 DPRXA6NFQ7 191 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 LIPT2A6NK58 231 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 HMGB1P1B2RPK0 211 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PDLIM1O00151 329 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 NPIPB7O75200 414 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SASH3O75995 380 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 IL32P24001 234 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ATP4BP51164 291 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 P2RY4P51582 365 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 FOXG1P55316 489 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SLC35A1P78382 337 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SLC17A1Q14916 467 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ADRM1Q16186 407 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SHEQ5VZ18 495 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 FBXW9Q5XUX1 488 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 WBP2NLQ6ICG8 309 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 DLEU7Q6UYE1 221 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 SERPINA11Q86U17 422 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 COMTD1Q86VU5 262 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF611Q8N823 705 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZIC4Q8N9L1 334 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 PIGXQ8TBF5 258 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 DDIT4LQ96D03 193 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CCL19Q99731 98 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 ZNF385DQ9H6B1 395 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 CCDC167Q9P0B6 97 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 EMC3Q9P0I2 261 aa11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 FN1P02751 2386 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-215ENST00000543359 GPR171O14626 319 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms