RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-219	ENST00000542848	FAM71C	Q8NEG0	241 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	OR10H5	Q8NGA6	315 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	OR8J2	Q8NGG1	315 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	PIGX	Q8TBF5	258 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	APH1A	Q96BI3	265 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	DHRS9	Q9BPW9	319 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	CCDC106	Q9BWC9	280 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	REPIN1	Q9BWE0	567 aa	Known RBP	10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	FAM107B	Q9H098	131 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	SAP130	Q9H0E3	1048 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	OR51I1	Q9H343	314 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	CBLN4	Q9NTU7	201 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	CHRNA9	Q9UGM1	479 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	SLC35A3	Q9Y2D2	325 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	NOSIP	Q9Y314	301 aa	Known RBP	10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	HDGFL3	Q9Y3E1	203 aa		10.45	□□□□□ -0.74
PTPN6-219	ENST00000542848	CENPVL1	A0A0U1RR11	272 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	RNF103-CHMP3	A0A140T963	221 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	CIB4	A0PJX0	185 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848		A8MV72	311 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848		E7EQL1	145 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	KIAA0513	O60268	411 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	SNX3	O60493	162 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	MRPL33	O75394	65 aa	Known RBP	10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	RAD51D	O75771	328 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	TFPI	P10646	304 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	UQCRC2	P22695	453 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	NUDT6	P53370	316 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	SLC16A1	P53985	500 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	MAPK14	Q16539	360 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	TYW3	Q6IPR3	259 aa	Known RBP	10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	C11orf71	Q6IPW1	123 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	GRINA	Q7Z429	371 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	FBXL14	Q8N1E6	418 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	CLEC4F	Q8N1N0	589 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	DEPDC4	Q8N2C3	294 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	PIAS4	Q8N2W9	510 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	CCDC197	Q8NCU1	140 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	VPS37A	Q8NEZ2	397 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	ZNF563	Q8TA94	476 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	XAGE5	Q8WWM1	108 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	MUS81	Q96NY9	551 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	CTPS2	Q9NRF8	586 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	ASB6	Q9NWX5	421 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	TAS2R16	Q9NYV7	291 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	KLHL14	Q9P2G3	628 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	TRAPPC4	Q9Y296	219 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	WDR45	Q9Y484	360 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	SLC25A15	Q9Y619	301 aa		10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
PTPN6-219	ENST00000542848	IGHV4-30-2	A0A087WSY4	118 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	PRSS51	A0A1B0GVH4	220 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	CCT8L1P	A6NM43	557 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	SLCO1B7	G3V0H7	640 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	SCN2B	O60939	215 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	IGHV3-9	P01782	118 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	OR12D1	P0DN82	309 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	PTN	P21246	168 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	CD40	P25942	277 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	MAGEA8	P43361	318 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	SLC1A6	P48664	564 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ZNF83	P51522	516 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ABCE1	P61221	599 aa	Known RBP	10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	IRX1	P78414	480 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	KCNJ10	P78508	379 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	H3F3A	P84243	136 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	RAB35	Q15286	201 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	GABRA6	Q16445	453 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ELOA3B	Q3SY89	546 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	CHRFAM7A	Q494W8	412 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	C1QTNF12	Q5T7M4	302 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ANXA8L1	Q5VT79	327 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	SLC22A25	Q6T423	547 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	CLEC2A	Q6UVW9	174 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	OLIG3	Q7RTU3	272 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	PIGW	Q7Z7B1	504 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ADGRG3	Q86Y34	549 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	MUC15	Q8N387	334 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ELOA3	Q8NG57	546 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	OR4A15	Q8NGL6	344 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	OR52N5	Q8NH56	324 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	STON2	Q8WXE9	905 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ROPN1L	Q96C74	230 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ARL5B	Q96KC2	179 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	TNFRSF13C	Q96RJ3	184 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	CACNG6	Q9BXT2	260 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	DPY30	Q9C005	99 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	AKTIP	Q9H8T0	292 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	EXOSC3	Q9NQT5	275 aa	Known RBP	10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	PARPBP	Q9NWS1	579 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	TMEM181	Q9P2C4	612 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	MALT1	Q9UDY8	824 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	HAO1	Q9UJM8	370 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	POU2F3	Q9UKI9	436 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848	ARL2BP	Q9Y2Y0	163 aa		10.43	□□□□□ -0.74
PTPN6-219	ENST00000542848		A0A096LNT2	108 aa		10.42	□□□□□ -0.74
PTPN6-219	ENST00000542848	FAM234B	A2RU67	622 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms