RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	SLC6A6	P31641	620 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	ACTA2	P62736	377 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	ACTG2	P63267	376 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	RUNX2	Q13950	521 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	DEFB134	Q4QY38	66 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	AGBL4	Q5VU57	503 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	SLC25A25	Q6KCM7	469 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	ARHGAP11A	Q6P4F7	1023 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	SERPINA12	Q8IW75	414 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	UXS1	Q8NBZ7	420 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	OR4K13	Q8NH42	304 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.91	□□□□□ -0.5
DDX11-223	ENST00000542838		A8MUA0	341 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	FMO6P	O60774	539 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	KHDRBS3	O75525	346 aa	Known RBP	11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	ECD	O95905	644 aa	Predicted RBP	11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	OR2T7	P0C7T2	308 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	TLX1	P31314	330 aa	Predicted RBP	11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	PSMB10	P40306	273 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	WAS	P42768	502 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	FGL2	Q14314	439 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	SEZ6L2	Q6UXD5	910 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	APOOL	Q6UXV4	268 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	PAQR7	Q86WK9	346 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	SLC35F2	Q8IXU6	374 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF614	Q8N883	585 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	OR2T27	Q8NH04	317 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	CNN2	Q99439	309 aa	Known RBP	11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	SLC25A18	Q9H1K4	315 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	NOX4	Q9NPH5	578 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	NANS	Q9NR45	359 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	KLHL9	Q9P2J3	617 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	PTPRS	Q13332	1948 aa		11.91	□□□□□ -0.5
DDX11-223	ENST00000542838	LRRC72	A6NJI9	287 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	KRT33A	O76009	404 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	CEACAM5	P06731	702 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	TYRP1	P17643	537 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	SRM	P19623	302 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	RAD52	P43351	418 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	EPHA4	P54764	986 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	RPS15A	P62244	130 aa	Known RBP	11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	RPL22L1	Q6P5R6	122 aa	Known RBP	11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	PRSS42	Q7Z5A4	293 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	GPAT4	Q86UL3	456 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	SYS1	Q8N2H4	156 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	FAM71C	Q8NEG0	241 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	CMTM3	Q96MX0	182 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	MFRP	Q9BY79	579 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	RNF208	Q9H0X6	261 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	PLEKHA1	Q9HB21	404 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	MCCC2	Q9HCC0	563 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	SERGEF	Q9UGK8	458 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838		A0A1B0GUH1	482 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	NAP1L6	A6NFF2	107 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF879	B4DU55	563 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	GABARAP	H6UMI1	98 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	SLC35G6	P0C7Q6	338 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	C4BPB	P20851	252 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	AP3S2	P59780	193 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	TCEA2	Q15560	299 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF613	Q6PF04	617 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	USP53	Q70EK8	1073 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	FCRLA	Q7L513	359 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	HMGB4	Q8WW32	186 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	SFXN2	Q96NB2	322 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	PTCHD1	Q96NR3	888 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF559	Q9BR84	538 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	TMEM74B	Q9NUR3	256 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	KLK11	Q9UBX7	282 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838	RABL2B	Q9UNT1	228 aa		11.9	□□□□□ -0.5
DDX11-223	ENST00000542838		L7N2F9	121 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	LDB3	O75112	727 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	ITGA10	O75578	1167 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	HIST1H1C	P16403	213 aa	Known RBP	11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	C3P1	Q6ZMU1	363 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	MEIOB	Q8N635	442 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	LCN9	Q8WX39	176 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	CNOT9	Q92600	299 aa	Known RBP	11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	ELMOD3	Q96FG2	381 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	SERINC2	Q96SA4	455 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	IL21R	Q9HBE5	538 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	NOX3	Q9HBY0	568 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	CAPN10	Q9HC96	672 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	POT1	Q9NUX5	634 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	C14orf105	Q9NVL8	296 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	FLRT3	Q9NZU0	649 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	ZNF69	Q9UC07	566 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838	DAPP1	Q9UN19	280 aa		11.9	□□□□□ -0.51
DDX11-223	ENST00000542838		A0A1B0GWA3	101 aa		11.89	□□□□□ -0.51
DDX11-223	ENST00000542838	hCG_1807616	A0A1W2PRN6	198 aa		11.89	□□□□□ -0.51
DDX11-223	ENST00000542838	GXYLT2	A0PJZ3	443 aa		11.89	□□□□□ -0.51
DDX11-223	ENST00000542838	ZNF860	A6NHJ4	632 aa		11.89	□□□□□ -0.51
DDX11-223	ENST00000542838	ACOD1	A6NK06	481 aa		11.89	□□□□□ -0.51
DDX11-223	ENST00000542838	ZNF749	O43361	778 aa		11.89	□□□□□ -0.51
DDX11-223	ENST00000542838	B3GALT2	O43825	422 aa		11.89	□□□□□ -0.51
DDX11-223	ENST00000542838	NGFR	P08138	427 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms