RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ADAMTSL1Q8N6G6 1762 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 A0A1W2PPE3 182 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SMCO3A2RU48 225 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 ZNF840PA6NDX5 716 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 MYMKA6NI61 221 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 OR6C65A6NJZ3 312 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 RNF212BA8MTL3 300 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SMIM1B2RUZ4 78 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 C11orf98E9PRG8 122 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 GOLGA8TH3BQL2 631 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 PRKAB2O43741 272 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 MAGEC1O60732 1142 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 RAMP3O60896 148 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 TRIM3O75382 744 aaPredicted RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 PAHP00439 452 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CRYAAP02489 173 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 OR9G9P0C7N8 305 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CCDC166P0CW27 439 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SELEP16581 610 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CPN2P22792 545 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 BMI1P35226 326 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 ATP5C1P36542 298 aaKnown RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 RPL4P36578 427 aaKnown RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 NUP62P37198 522 aaPredicted RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CDKN2AP42771 156 aaKnown RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CRYBB2P43320 205 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 GYG1P46976 350 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 POU3F4P49335 361 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 NDST2P52849 883 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 ARPC4P59998 168 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 PLP1P60201 277 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 GNG11P61952 73 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 RPS6P62753 249 aaKnown RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CTAG1AP78358 180 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 ILF3Q12906 894 aaKnown RBP eCLIP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 KLRB1Q12918 225 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 FAM189A2Q15884 450 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SNCBQ16143 134 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 IZUMO4Q1ZYL8 232 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SMUG1Q53HV7 270 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 FBXO48Q5FWF7 155 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 FAM76BQ5HYJ3 339 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CCDC122Q5T0U0 273 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 OTUD3Q5T2D3 398 aaPredicted RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 AGBL2Q5U5Z8 902 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 THOC7Q6I9Y2 204 aaKnown RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 NADSYN1Q6IA69 706 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC35E4Q6ICL7 350 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 PAQR6Q6TCH4 344 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 STOX1Q6ZVD7 989 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 UTS2BQ765I0 119 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CEACAM19Q7Z692 300 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 KCNMB4Q86W47 210 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SERPINA9Q86WD7 417 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC35F2Q8IXU6 374 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 LINC01561Q8N1V8 128 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SDR9C7Q8NEX9 313 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 OR2L3Q8NG85 312 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 TBCKQ8TEA7 893 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 NTNG2Q96CW9 530 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 DNAJA3Q96EY1 480 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 TIMD4Q96H15 378 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 IFT74Q96LB3 600 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 C12orf42Q96LP6 360 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 NSMCE3Q96MG7 304 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 RCHY1Q96PM5 261 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 IL4I1Q96RQ9 567 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 TSC22D3Q99576 134 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 SIKE1Q9BRV8 207 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 ST6GALNAC5Q9BVH7 336 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 RBM4Q9BWF3 364 aaKnown RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 OSBPL10Q9BXB5 764 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 AZI2Q9H6S1 392 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 VCPKMTQ9H867 229 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CYP3A43Q9HB55 503 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 ADGRL4Q9HBW9 690 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 IL1RAPQ9NPH3 570 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 FAM120CQ9NX05 1096 aaKnown RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 UBAP1Q9NZ09 502 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 RCOR3Q9P2K3 495 aaPredicted RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 PITPNC1Q9UKF7 332 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 AK6Q9Y3D8 172 aaKnown RBP3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 OARD1Q9Y530 152 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 GMPPBQ9Y5P6 360 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 CSNK1G3Q9Y6M4 447 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 COMMD3-BMI1R4GMX3 469 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 RGPD5Q99666 1765 aa3.3□□□□□ -1.88
SFSWAP-211ENST00000542813 PIEZO1Q92508 2521 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 A0A087WW49 117 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 TRAV25A0A0B4J276 109 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 IGHV3-20A0A0C4DH32 117 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 TRBV5-4A0A0C4DH59 114 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 IGLON5A6NGN9 336 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 FRG2CA6NGY1 282 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 F5H6K3 240 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 K7EQD1 137 aa3.29□□□□□ -1.88
SFSWAP-211ENST00000542813 FGF17O60258 216 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms