RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 RYKP34925 604 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 CCT5P48643 541 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 OR2B6P58173 313 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 PRPS1P60891 318 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 SNRPD2P62316 118 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 FAM153CQ494X1 144 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 IQCCQ4KMZ1 466 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 GRINAQ7Z429 371 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 NATD1Q8N6N6 113 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 ZNF563Q8TA94 476 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 C3orf30Q96M34 536 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 VRK1Q99986 396 aaPredicted RBP15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 TMEM181Q9P2C4 612 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 TRAPPC4Q9Y296 219 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 SLC9A8Q9Y2E8 581 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 IGHV1-18A0A0C4DH31 117 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 DUXAA6NLW8 204 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 CFLARO15519 480 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 AK1P00568 194 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 IMPDH2P12268 514 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 CFPP27918 469 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 MAPK1P28482 360 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 MPGP29372 298 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 SOAT1P35610 550 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 SERPINF1P36955 418 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 CLK1P49759 484 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 SLC17A1Q14916 467 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 ZSWIM7Q19AV6 140 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 HIKESHIQ53FT3 197 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 C1QTNF12Q5T7M4 302 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 AP1ARQ63HQ0 302 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 TYW3Q6IPR3 259 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 EMBQ6PCB8 327 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 SLC46A3Q7Z3Q1 461 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 C6orf120Q7Z4R8 191 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 BOD1Q96IK1 185 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 PPP3R2Q96LZ3 170 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 DUSP26Q9BV47 211 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 BHLHE41Q9C0J9 482 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 CA10Q9NS85 328 aa15.51■□□□□ 0.07
CLSTN3-214ENST00000542663 KLF11O14901 512 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 TRIM13O60858 407 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 LYPLA1O75608 230 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 CCNA2P20248 432 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 TGFBR3Q03167 851 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 FUT5Q11128 374 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 ADIPOQQ15848 244 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 C6orf136Q5SQH8 315 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 IL23RQ5VWK5 629 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 BHLHB9Q6PI77 547 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 HMGN2P46Q86SG4 172 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 CLECL1Q8IZS7 167 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 CNPY4Q8N129 248 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 ZIC4Q8N9L1 334 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 ZG16BQ96DA0 208 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 SLC35G5Q96KT7 338 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 OR51I1Q9H343 314 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 PARPBPQ9NWS1 579 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 SLC35A3Q9Y2D2 325 aa15.5■□□□□ 0.07
CLSTN3-214ENST00000542663 CLDN24A6NM45 220 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 B9A039 149 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 COPEO14579 308 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 LILRA1O75019 489 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 STAMBPO95630 424 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 WNT11O96014 354 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 CDH2P19022 906 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 PRPS1L1P21108 318 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 FKBP2P26885 142 aaKnown RBP15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 GIFP27352 417 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 EFNB3Q15768 340 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 C16orf62Q7Z3J2 963 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 SPATA19Q7Z5L4 167 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 ZNF540Q8NDQ6 660 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 AGR3Q8TD06 166 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 MIPOL1Q8TD10 442 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 TMEM45BQ96B21 275 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 SLC38A2Q96QD8 506 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 PRPF18Q99633 342 aaKnown RBP15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 SAP130Q9H0E3 1048 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 PLK3Q9H4B4 646 aa15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 TMEFF2Q9UIK5 374 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-214ENST00000542663 MEGF8Q7Z7M0 2845 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 TMED7-TICAM2A0A0A6YYA0 188 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 TMEM72A0PK05 275 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 ZC3H12DA2A288 527 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 AP3D1O14617 1153 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 EIF1BO60739 113 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 PDE5AO76074 875 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 SHBGP04278 402 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 GUSBP08236 651 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 TACSTD2P09758 323 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 OR4A8P0C604 315 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 IDH2P48735 452 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 PPOXP50336 477 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 SLC35A1P78382 337 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 ATP6AP1LQ52LC2 224 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 KLHL24Q6TFL4 600 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 FRRS1Q6ZNA5 592 aa15.48■□□□□ 0.07
CLSTN3-214ENST00000542663 OIT3Q8WWZ8 545 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms