RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 GPR119Q8TDV5 335 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 SGCZQ96LD1 299 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 HES7Q9BYE0 225 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 LHX6Q9UPM6 363 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 ELOA3DA6NLF2 546 aaPredicted RBP25.2■■□□□ 1.63
CCM2-218ENST00000541586 B4DXG7 233 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 CASP3P42574 277 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 ELOA3BQ3SY89 546 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 SLC22A10Q63ZE4 541 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 ZNF620Q6ZNG0 422 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 DND1Q8IYX4 353 aaKnown RBP25.2■■□□□ 1.63
CCM2-218ENST00000541586 IQCF1Q8N6M8 205 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 TSPAN14Q8NG11 270 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 ELOA3Q8NG57 546 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 IMPAD1Q9NX62 359 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 ZNF226Q9NYT6 803 aa25.2■■□□□ 1.63
CCM2-218ENST00000541586 TRIM64A6NGJ6 449 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 UNC119BA6NIH7 251 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 G3V3Y1 287 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 M0R129 80 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 CCL3P10147 92 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 FUT1P19526 365 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 TACR3P29371 465 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 GIPRP48546 466 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 CRYZQ08257 329 aaKnown RBP25.2■■□□□ 1.62
CCM2-218ENST00000541586 PRAMEF20Q5VT98 475 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 C12orf73Q69YU5 71 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 RBMXL3Q8N7X1 1067 aaKnown RBP25.2■■□□□ 1.62
CCM2-218ENST00000541586 OR8D4Q8NGM9 314 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 RHOXF1Q8NHV9 184 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 TEX47Q8TBZ9 253 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 APH1BQ8WW43 257 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 TIMMDC1Q9NPL8 285 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 IL20Q9NYY1 176 aa25.2■■□□□ 1.62
CCM2-218ENST00000541586 IGKV1D-42A0A075B6H8 117 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 ENO4A6NNW6 628 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 WBP4O75554 376 aaKnown RBP25.19■■□□□ 1.62
CCM2-218ENST00000541586 CD46P15529 392 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 CRHBPP24387 322 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 FMO3P31513 532 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 CDH15P55291 814 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 CDK5Q00535 292 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 GINS1Q14691 196 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 QPRTQ15274 297 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 PSD4Q8NDX1 1056 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 SLC25A18Q9H1K4 315 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 C12orf10Q9HB07 376 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 WIF1Q9Y5W5 379 aa25.19■■□□□ 1.62
CCM2-218ENST00000541586 SLC1A7O00341 560 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 P04436 131 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 GP1BBP13224 206 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 APOFQ13790 326 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 ZNF766Q5HY98 468 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 PCSK4Q6UW60 755 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 MDS2Q8NDY4 140 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 C5orf34Q96MH7 638 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 MRPS26Q9BYN8 205 aaKnown RBP25.18■■□□□ 1.62
CCM2-218ENST00000541586 SLC19A3Q9BZV2 496 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 SDHAF3Q9NRP4 125 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 TAS2R10Q9NYW0 307 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 MED11Q9P086 117 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 PPP4R1LQ9P1A2 415 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 HRH3Q9Y5N1 445 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 CDH10Q9Y6N8 788 aa25.18■■□□□ 1.62
CCM2-218ENST00000541586 ANKUB1A6NFN9 424 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 EFCAB9A8MZ26 197 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 CDK2AP1O14519 115 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 SP1P08047 785 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 SAGP10523 405 aaPredicted RBP25.17■■□□□ 1.62
CCM2-218ENST00000541586 ATP6V1B1P15313 513 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 GABRB1P18505 474 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 SUMO3P55854 103 aaPredicted RBP25.17■■□□□ 1.62
CCM2-218ENST00000541586 GPR85P60893 370 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 TOP3AQ13472 1001 aaPredicted RBP25.17■■□□□ 1.62
CCM2-218ENST00000541586 SLC25A25Q6KCM7 469 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 CCDC103Q8IW40 242 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 CLDN22Q8N7P3 220 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 BPIFB6Q8NFQ5 453 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 PAQR8Q8TEZ7 354 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 OSTF1Q92882 214 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 SECISBP2Q96T21 854 aaKnown RBP25.17■■□□□ 1.62
CCM2-218ENST00000541586 SLC25A19Q9HC21 320 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 RYDENQ9NUL5 291 aaKnown RBP25.17■■□□□ 1.62
CCM2-218ENST00000541586 PCNX3Q9H6A9 2034 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 CDC40O60508 579 aaKnown RBP eCLIP25.17■■□□□ 1.62
CCM2-218ENST00000541586 SMSP52788 366 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 SMN1Q16637 294 aaKnown RBP25.17■■□□□ 1.62
CCM2-218ENST00000541586 ACSM5Q6NUN0 579 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 CASP12Q6UXS9 341 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 OR13C2Q8NGS9 318 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 ZNF566Q969W8 418 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 TMEM43Q9BTV4 400 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 SACM1LQ9NTJ5 587 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 TBC1D23Q9NUY8 699 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 OSGIN1Q9UJX0 560 aa25.17■■□□□ 1.62
CCM2-218ENST00000541586 IGLV3-32A0A0A0MS00 114 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 TRAV17A0A0B4J275 112 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 CCDC159P0C7I6 412 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 SFTPCP11686 197 aa25.16■■□□□ 1.62
CCM2-218ENST00000541586 CXCR4P61073 352 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms