RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 HDGFL3Q9Y3E1 203 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 WIPI2Q9Y4P8 454 aa8.07□□□□□ -1.12
YBX3-211ENST00000541351 IGHV2OR16-5A0A0B4J2B6 119 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 IGHV1-69-2A0A0G2JMI3 117 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 GNG14A0A1W2PPG7 69 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 SLC22A23A1A5C7 686 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 ISPDA4D126 451 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 UPK1AO00322 258 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 ANKRD28O15084 1053 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 PPP1R3DO95685 299 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 PMS2P2O95744 297 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 IGHMP01871 453 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 TFPIP10646 304 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 CBR1P16152 277 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 ATP6V1C1P21283 382 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 NR4A1P22736 598 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 GLRXP35754 106 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 CRYBB2P43320 205 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 ALDH3B1P43353 468 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 CLK1P49759 484 aaKnown RBP8.06□□□□□ -1.12
YBX3-211ENST00000541351 GALK2Q01415 458 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 NKPD1Q17RQ9 610 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 DEFB121Q5J5C9 76 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 KLF17Q5JT82 389 aaPredicted RBP8.06□□□□□ -1.12
YBX3-211ENST00000541351 RNASEH2BQ5TBB1 312 aaKnown RBP8.06□□□□□ -1.12
YBX3-211ENST00000541351 GKAP1Q5VSY0 366 aaPredicted RBP8.06□□□□□ -1.12
YBX3-211ENST00000541351 KRT80Q6KB66 452 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 TMEM107Q6UX40 140 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 CCBE1Q6UXH8 406 aaPredicted RBP8.06□□□□□ -1.12
YBX3-211ENST00000541351 AGGF1Q8N302 714 aaeCLIP8.06□□□□□ -1.12
YBX3-211ENST00000541351 TMCO5AQ8N6Q1 288 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 NAT8LQ8N9F0 302 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 CPEB3Q8NE35 698 aaKnown RBP8.06□□□□□ -1.12
YBX3-211ENST00000541351 OR1K1Q8NGR3 316 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 MGARPQ8TDB4 240 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 GPR119Q8TDV5 335 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 SSMEM1Q8WWF3 244 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 ST8SIA1Q92185 356 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 JADE3Q92613 823 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 MRPL37Q9BZE1 423 aaKnown RBP8.06□□□□□ -1.12
YBX3-211ENST00000541351 LAT2Q9GZY6 243 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 LACRTQ9GZZ8 138 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 CENPHQ9H3R5 247 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 PIF1Q9H611 641 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 CRLF2Q9HC73 371 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 DECR2Q9NUI1 292 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 UBAP1Q9NZ09 502 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 GRHL1Q9NZI5 618 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 KIF17Q9P2E2 1029 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 NKX1-2Q9UD57 310 aaPredicted RBP8.06□□□□□ -1.12
YBX3-211ENST00000541351 IL20RAQ9UHF4 553 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 RNF11Q9Y3C5 154 aa8.06□□□□□ -1.12
YBX3-211ENST00000541351 PLXNB1O43157 2135 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 TPD52L2O43399 206 aaKnown RBP8.05□□□□□ -1.12
YBX3-211ENST00000541351 CDC14BO60729 498 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 NKX2-2O95096 273 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 PSMG1O95456 288 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 FGGP02679 453 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 IL3P08700 152 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 IGFBP1P08833 259 aaPredicted RBP8.05□□□□□ -1.12
YBX3-211ENST00000541351 PRPS2P11908 318 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 PTDSS1P48651 473 aaKnown RBP8.05□□□□□ -1.12
YBX3-211ENST00000541351 CCR4P51679 360 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 ALDH18A1P54886 795 aaKnown RBP8.05□□□□□ -1.12
YBX3-211ENST00000541351 KRTAP10-3P60369 221 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 RELBQ01201 579 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 GALNT1Q10472 559 aaPredicted RBP8.05□□□□□ -1.12
YBX3-211ENST00000541351 BST1Q10588 318 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 LARS2Q15031 903 aaKnown RBP8.05□□□□□ -1.12
YBX3-211ENST00000541351 TRADDQ15628 312 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 MOGQ16653 247 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 TRMT5Q32P41 509 aaKnown RBP8.05□□□□□ -1.12
YBX3-211ENST00000541351 TIGD2Q4W5G0 525 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 BTNL3Q6UXE8 466 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 GDPGP1Q6ZNW5 385 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 ZBED8Q8IZ13 594 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 PDIK1LQ8N165 341 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 OR5W2Q8NH69 310 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 PIK3R3Q92569 461 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 TMEM45BQ96B21 275 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 ELMOD3Q96FG2 381 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 CFAP36Q96G28 342 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 DIRC2Q96SL1 478 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 CHIAQ9BZP6 476 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 PRDM13Q9H4Q3 707 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 NOX3Q9HBY0 568 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 MIEF1Q9NQG6 463 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 NKIRAS2Q9NYR9 191 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 OR5V1Q9UGF6 321 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 SNX6Q9UNH7 406 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 POLR3KQ9Y2Y1 108 aaPredicted RBP8.05□□□□□ -1.12
YBX3-211ENST00000541351 INSIG2Q9Y5U4 225 aa8.05□□□□□ -1.12
YBX3-211ENST00000541351 TET2Q6N021 2002 aaPredicted RBP8.04□□□□□ -1.12
YBX3-211ENST00000541351 GXYLT2A0PJZ3 443 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 MYO1GB0I1T2 1018 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 E9PQ18 207 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 POC1B-GALNT4F8VUJ3 575 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 UBXN8O00124 270 aa8.04□□□□□ -1.12
YBX3-211ENST00000541351 ETV2O00321 342 aaPredicted RBP8.04□□□□□ -1.12
YBX3-211ENST00000541351 GPR37O15354 613 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms