RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 DNAJA1P31689 397 aaKnown RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 PTGDSP41222 190 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 HSPA13P48723 471 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 CCR4P51679 360 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 POLR2HP52434 150 aaKnown RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ZNF136P52737 540 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 VLDLRP98155 873 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 MVKQ03426 396 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 MERTKQ12866 999 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 SELENBP1Q13228 472 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 SRSF6Q13247 344 aaKnown RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 KCNAB2Q13303 367 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 RCN1Q15293 331 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 SF3B4Q15427 424 aaKnown RBP eCLIP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 CD226Q15762 336 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 TBR1Q16650 682 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 COL28A1Q2UY09 1125 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ANKRD39Q53RE8 183 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ALG10BQ5I7T1 473 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 PDSS1Q5T2R2 415 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 FCRLBQ6BAA4 426 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 RPL13AP3Q6NVV1 102 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 DEF8Q6ZN54 512 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 LINC00696Q6ZRV3 163 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 Q6ZS92 163 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 VTCN1Q7Z7D3 282 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 GALNT10Q86SR1 603 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 MARCH3Q86UD3 253 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 LSRQ86X29 649 aaPredicted RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 CDK20Q8IZL9 346 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 CLIP4Q8N3C7 705 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 GTPBP8Q8N3Z3 284 aaPredicted RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 FAM109AQ8N4B1 249 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 OR2M7Q8NG81 312 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 OR6T1Q8NGN1 323 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 OR5M3Q8NGP4 307 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 OR5K1Q8NHB7 308 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 C9orf43Q8TAL5 461 aaPredicted RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 GPR119Q8TDV5 335 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ADAMTS16Q8TE57 1224 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 PYDC1Q8WXC3 89 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ACOT11Q8WXI4 607 aaPredicted RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 PNPLA2Q96AD5 504 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 DDIT4LQ96D03 193 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ZG16BQ96DA0 208 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 C1GALT1C1Q96EU7 318 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 SLC41A3Q96GZ6 507 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 TMEM43Q9BTV4 400 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 C9orf16Q9BUW7 83 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ZNF426Q9BUY5 554 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 AMBRA1Q9C0C7 1298 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 OR2B2Q9GZK3 357 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 QRSL1Q9H0R6 528 aaKnown RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ZNF703Q9H7S9 590 aaPredicted RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 LIN28AQ9H9Z2 209 aaKnown RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ACKR4Q9NPB9 350 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 FBXO34Q9NWN3 711 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 DKKL1Q9UK85 242 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 B3GNT3Q9Y2A9 372 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 CARD8Q9Y2G2 431 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 SAMHD1Q9Y3Z3 626 aaKnown RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 ORC6Q9Y5N6 252 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 KNTC1P50748 2209 aa5.2□□□□□ -1.58
CDKN3-206ENST00000541304 CNOT1A5YKK6 2376 aaKnown RBP5.2□□□□□ -1.58
CDKN3-206ENST00000541304 CFAP54Q96N23 3096 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 A0A087WUJ7 227 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 NPIPA5A0A0B4J1W7 369 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 CENPVL1A0A0U1RR11 272 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 A0A1B0GWA3 101 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 A8MVM7 634 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 NPIPA7E9PJI5 369 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 H0YJX3 145 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 H3BNX3 289 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 hCG_2039718K7EN88 272 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 TNFRSF11BO00300 401 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 HCN1O60741 890 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 NME6O75414 186 aaPredicted RBP5.19□□□□□ -1.58
CDKN3-206ENST00000541304 CYP7B1O75881 506 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 CCNB2O95067 398 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 RASAL1O95294 804 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 NTN1O95631 604 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 ATP6V1G2O95670 118 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 EPPINO95925 133 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 ACTL6AO96019 429 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 ADAP00813 363 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 MT-ATP6P00846 226 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 HPNP05981 417 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 CD3EP07766 207 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 NPIPA8P0DM63 369 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 ANPEPP15144 967 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 ZNF24P17028 368 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 CHMP24386 653 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 CXCR1P25024 350 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 DPP4P27487 766 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 GDF1P27539 372 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 ACAA2P42765 397 aaKnown RBP5.19□□□□□ -1.58
CDKN3-206ENST00000541304 OR1E2P47887 323 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 IDH2P48735 452 aaKnown RBP5.19□□□□□ -1.58
CDKN3-206ENST00000541304 SLC9A3P48764 834 aa5.19□□□□□ -1.58
CDKN3-206ENST00000541304 SPIBQ01892 262 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms