RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	HNRNPCL4	P0DMR1	293 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	HTR3A	P46098	478 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	CLK1	P49759	484 aa	Known RBP	12.08	□□□□□ -0.48
POLE-215	ENST00000540987	OR2B6	P58173	313 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	KEAP1	Q14145	624 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	GCNT6	Q5T4J0	391 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	PRAMEF8	Q5VWM4	474 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	PRAMEF7	Q5VXH5	474 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	KRTAP1-3	Q8IUG1	177 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	CCDC103	Q8IW40	242 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	NFKBID	Q8NI38	313 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	TMEM45A	Q9NWC5	275 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	GMEB1	Q9Y692	573 aa		12.08	□□□□□ -0.48
POLE-215	ENST00000540987	MTOR	P42345	2549 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987		A0A1W2PP18	115 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	TMEM247	A6NEH6	219 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	TMEM229A	B2RXF0	380 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	PGM3	O95394	542 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	PLAU	P00749	431 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	UQCRB	P14927	111 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	COX5A	P20674	150 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	NTF4	P34130	210 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	SLC16A1	P53985	500 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	IRX1	P78414	480 aa	Predicted RBP	12.07	□□□□□ -0.48
POLE-215	ENST00000540987	H3F3A	P84243	136 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	HOXC5	Q00444	222 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	BNIP2	Q12982	314 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	LARS2	Q15031	903 aa	Known RBP	12.07	□□□□□ -0.48
POLE-215	ENST00000540987	PDK3	Q15120	406 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	BEX5	Q5H9J7	111 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	ZNF311	Q5JNZ3	666 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	SFRP5	Q5T4F7	317 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	DLEU7	Q6UYE1	221 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987		Q6ZT83	130 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	GALNT5	Q7Z7M9	940 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	ATG4D	Q86TL0	474 aa	Predicted RBP	12.07	□□□□□ -0.48
POLE-215	ENST00000540987	RETREG3	Q86VR2	466 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	CADM2	Q8N3J6	435 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	STEAP2	Q8NFT2	490 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	PIGX	Q8TBF5	258 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	C3orf49	Q96BT1	292 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	DDIT4L	Q96D03	193 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	ZHX1-C8orf76	Q96EF9	292 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	UBTD1	Q9HAC8	227 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	FANCF	Q9NPI8	374 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	TMEM181	Q9P2C4	612 aa		12.07	□□□□□ -0.48
POLE-215	ENST00000540987	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	12.07	□□□□□ -0.48
POLE-215	ENST00000540987	ROS1	P08922	2347 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	LYZL6	O75951	148 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	NCF2	P19878	526 aa	Predicted RBP	12.06	□□□□□ -0.48
POLE-215	ENST00000540987	IGHV1-2	P23083	117 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	PPIB	P23284	216 aa	Known RBP	12.06	□□□□□ -0.48
POLE-215	ENST00000540987	IL32	P24001	234 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	FKBP2	P26885	142 aa	Known RBP	12.06	□□□□□ -0.48
POLE-215	ENST00000540987	SELPLG	Q14242	412 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	TAB1	Q15750	504 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	ADRM1	Q16186	407 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	WBP2NL	Q6ICG8	309 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	CGB2	Q6NT52	195 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	BHLHA15	Q7RTS1	189 aa	Predicted RBP	12.06	□□□□□ -0.48
POLE-215	ENST00000540987	DHDDS	Q86SQ9	333 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	TGIF2LY	Q8IUE0	185 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	KISS1R	Q969F8	398 aa	Predicted RBP	12.06	□□□□□ -0.48
POLE-215	ENST00000540987	PLPPR2	Q96GM1	343 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	TMEM204	Q9BSN7	226 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	TMUB1	Q9BVT8	246 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	POTEKP	Q9BYX7	375 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	EMC3	Q9P0I2	261 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	EDAR	Q9UNE0	448 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	TRAPPC4	Q9Y296	219 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	IFT52	Q9Y366	437 aa		12.06	□□□□□ -0.48
POLE-215	ENST00000540987	ZNF469	Q96JG9	3925 aa	Predicted RBP	12.06	□□□□□ -0.48
POLE-215	ENST00000540987	FLNA	P21333	2647 aa	Known RBP	12.06	□□□□□ -0.48
POLE-215	ENST00000540987		A0A0G2JND7	137 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	LIPT2	A6NK58	231 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	C5orf58	C9J3I9	102 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	IGHV3-9	P01782	118 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	ETS2	P15036	469 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	GPX2	P18283	190 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	FPR1	P21462	350 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	HTR2A	P28223	471 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	ADSL	P30566	484 aa	Predicted RBP	12.05	□□□□□ -0.48
POLE-215	ENST00000540987	IDUA	P35475	653 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	FOXG1	P55316	489 aa	Predicted RBP	12.05	□□□□□ -0.48
POLE-215	ENST00000540987	SLC35A1	P78382	337 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	CDK6	Q00534	326 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	FOXD4	Q12950	439 aa	Predicted RBP	12.05	□□□□□ -0.48
POLE-215	ENST00000540987	ITGAD	Q13349	1161 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	P2RY6	Q15077	328 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	ACKR1	Q16570	336 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	ZSWIM7	Q19AV6	140 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	GLIPR1L2	Q4G1C9	344 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	RUNDC3A	Q59EK9	446 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	ALKBH2	Q6NS38	261 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	DHRS4L2	Q6PKH6	230 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	ZNF704	Q6ZNC4	412 aa	Predicted RBP	12.05	□□□□□ -0.48
POLE-215	ENST00000540987	PTOV1	Q86YD1	416 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	ZNF100	Q8IYN0	542 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	DPP10	Q8N608	796 aa		12.05	□□□□□ -0.48
POLE-215	ENST00000540987	WFDC11	Q8NEX6	87 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms