RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 RNF115Q9Y4L5 304 aa18.55■□□□□ 0.56
CHFR-217ENST00000540537 EIF1BO60739 113 aaKnown RBP18.54■□□□□ 0.56
CHFR-217ENST00000540537 BCHEP06276 602 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 TFPTP0C1Z6 253 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 PAX1P15863 534 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 CCNA2P20248 432 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 IGHV1-2P23083 117 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 OR2B6P58173 313 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 SLC35A1P78382 337 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 H3F3AP84243 136 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 CAPRIN1Q14444 709 aaKnown RBP18.54■□□□□ 0.56
CHFR-217ENST00000540537 ZSWIM7Q19AV6 140 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 SEZ6L2Q6UXD5 910 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 ZNF836Q6ZNA1 936 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.54■□□□□ 0.56
CHFR-217ENST00000540537 LRRC8CQ8TDW0 803 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 SLC38A5Q8WUX1 472 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 TMEM171Q8WVE6 324 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 AKAP1Q92667 903 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHFR-217ENST00000540537 GTF2H4Q92759 462 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 DNAJA3Q96EY1 480 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 AURKBQ96GD4 344 aaPredicted RBP18.54■□□□□ 0.56
CHFR-217ENST00000540537 ADAM19Q9H013 955 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 TCF7L2Q9NQB0 619 aa18.54■□□□□ 0.56
CHFR-217ENST00000540537 TMEM247A6NEH6 219 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 POLR3GO15318 223 aaPredicted RBP18.53■□□□□ 0.56
CHFR-217ENST00000540537 CD3EP07766 207 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 INHBBP09529 407 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 PTH2RP49190 550 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 STX1BP61266 288 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 RNF220Q5VTB9 566 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 FBXW9Q5XUX1 488 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 YTHDF3Q7Z739 585 aaKnown RBP18.53■□□□□ 0.56
CHFR-217ENST00000540537 P2RY8Q86VZ1 359 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 VRK2Q86Y07 508 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 CCDC103Q8IW40 242 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 APH1AQ96BI3 265 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 TMEM19Q96HH6 336 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 ATP6V1G3Q96LB4 118 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 PAIP1Q9H074 479 aaKnown RBP18.53■□□□□ 0.56
CHFR-217ENST00000540537 RAD21L1Q9H4I0 556 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 CXorf56Q9H5V9 222 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 RLIMQ9NVW2 624 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 ZNF443Q9Y2A4 671 aaPredicted RBP18.53■□□□□ 0.56
CHFR-217ENST00000540537 PCDHB14Q9Y5E9 798 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 NAV3Q8IVL0 2385 aa18.53■□□□□ 0.56
CHFR-217ENST00000540537 A0A0G2JPF8 293 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 HNRNPCL2B2RXH8 293 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 HNRNPCL3B7ZW38 293 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 HNRNPCL1O60812 293 aaKnown RBP18.52■□□□□ 0.56
CHFR-217ENST00000540537 PGM3O95394 542 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 THBS1P07996 1170 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 HNRNPCL4P0DMR1 293 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 IMPDH2P12268 514 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 GGT1P19440 569 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 ACAA2P42765 397 aaKnown RBP18.52■□□□□ 0.56
CHFR-217ENST00000540537 LARS2Q15031 903 aaKnown RBP18.52■□□□□ 0.56
CHFR-217ENST00000540537 PPA1Q15181 289 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 TIMM23BQ5SRD1 257 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 ZNF433Q8N7K0 673 aaPredicted RBP18.52■□□□□ 0.56
CHFR-217ENST00000540537 LILRB1Q8NHL6 650 aaPredicted RBP18.52■□□□□ 0.56
CHFR-217ENST00000540537 POM121Q96HA1 1249 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 Q96MF0 132 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 NAA11Q9BSU3 229 aaPredicted RBP18.52■□□□□ 0.56
CHFR-217ENST00000540537 CACYBPQ9HB71 228 aaKnown RBP18.52■□□□□ 0.56
CHFR-217ENST00000540537 SLCO1B3Q9NPD5 702 aa18.52■□□□□ 0.56
CHFR-217ENST00000540537 ZNF701Q9NV72 531 aaPredicted RBP18.52■□□□□ 0.56
CHFR-217ENST00000540537 CLOCKO15516 846 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 RAMP1O60894 148 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 MRPL33O75394 65 aaKnown RBP18.51■□□□□ 0.55
CHFR-217ENST00000540537 GKN3PP0CG01 181 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 HOXB9P17482 250 aaPredicted RBP18.51■□□□□ 0.55
CHFR-217ENST00000540537 ADSLP30566 484 aaPredicted RBP18.51■□□□□ 0.55
CHFR-217ENST00000540537 BSPH1Q075Z2 132 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 FADDQ13158 208 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 RGNQ15493 299 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 STK11Q15831 433 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 KRTAP21-3Q3LHN1 58 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 RPS26P11Q5JNZ5 115 aaPredicted RBP18.51■□□□□ 0.55
CHFR-217ENST00000540537 PRAMEF8Q5VWM4 474 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 PRAMEF7Q5VXH5 474 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 SLC2A7Q6PXP3 512 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 UBE2J2Q8N2K1 259 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 MUCL1Q96DR8 90 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 CCDC28BQ9BUN5 200 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 SPATA9Q9BWV2 254 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 ARMC7Q9H6L4 198 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 MALT1Q9UDY8 824 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 ZNF232Q9UNY5 417 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 IFT52Q9Y366 437 aa18.51■□□□□ 0.55
CHFR-217ENST00000540537 A0A096LPI6 279 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 ZC3H12DA2A288 527 aaKnown RBP18.5■□□□□ 0.55
CHFR-217ENST00000540537 DPRXA6NFQ7 191 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 OR5H1A6NKK0 313 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 CLIC1O00299 241 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 BMP2P12643 396 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 CXCR1P25024 350 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 NTF4P34130 210 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 IDH3AP50213 366 aa18.5■□□□□ 0.55
CHFR-217ENST00000540537 COPZ1P61923 177 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms