RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 S100PBPQ96BU1 408 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 TMEM19Q96HH6 336 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 CGREF1Q99674 301 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 ELAC2Q9BQ52 826 aaKnown RBP13.28□□□□□ -0.28
USB1-203ENST00000539737 CPPED1Q9BRF8 314 aaPredicted RBP13.28□□□□□ -0.28
USB1-203ENST00000539737 MTHFD2LQ9H903 347 aaPredicted RBP13.28□□□□□ -0.28
USB1-203ENST00000539737 TIGARQ9NQ88 270 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.28□□□□□ -0.28
USB1-203ENST00000539737 MED17Q9NVC6 651 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 SLAMF8Q9P0V8 285 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 KCNE5Q9UJ90 142 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 CARD8Q9Y2G2 431 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 DSPPQ9NZW4 1301 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 CENPVL1A0A0U1RR11 272 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 AGAP5A6NIR3 686 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 GJE1A6NN92 205 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 C5orf58C9J3I9 102 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 SNX3O60493 162 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 TFPTP0C1Z6 253 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 PABPC4LP0CB38 370 aaKnown RBP13.27□□□□□ -0.29
USB1-203ENST00000539737 RPS4Y1P22090 263 aaKnown RBP13.27□□□□□ -0.29
USB1-203ENST00000539737 EIF1P41567 113 aaKnown RBP13.27□□□□□ -0.29
USB1-203ENST00000539737 CCR4P51679 360 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 RPS4XP62701 263 aaKnown RBP13.27□□□□□ -0.29
USB1-203ENST00000539737 RAC1P63000 192 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 SKP2Q13309 424 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 CBFBQ13951 182 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 MAPK14Q16539 360 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 PLPPR5Q32ZL2 321 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 LIN52Q52LA3 116 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 REP15Q6BDI9 236 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 ESPNLQ6ZVH7 1005 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 SNX32Q86XE0 403 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 FAM71CQ8NEG0 241 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 OR5W2Q8NH69 310 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 OR10D3Q8NH80 312 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 BBS10Q8TAM1 723 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 SLC38A5Q8WUX1 472 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 WDR60Q8WVS4 1066 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 ROBO4Q8WZ75 1007 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 ANKRD27Q96NW4 1050 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 LAT2Q9GZY6 243 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 SLCO5A1Q9H2Y9 848 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 EXOSC3Q9NQT5 275 aaKnown RBP13.27□□□□□ -0.29
USB1-203ENST00000539737 GLRX2Q9NS18 164 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 ICAM5Q9UMF0 924 aa13.27□□□□□ -0.29
USB1-203ENST00000539737 A0A0G2JPF8 293 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 HNRNPCL2B2RXH8 293 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 HNRNPCL3B7ZW38 293 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 TNFSF11O14788 317 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 MRASO14807 208 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 HNRNPCL1O60812 293 aaKnown RBP13.26□□□□□ -0.29
USB1-203ENST00000539737 NPPAP01160 153 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 DANCRP0C864 163 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 UBTFL6P0CB48 400 aaPredicted RBP13.26□□□□□ -0.29
USB1-203ENST00000539737 HNRNPCL4P0DMR1 293 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 ARAFP10398 606 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 GPX2P18283 190 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 ELK4P28324 431 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 CYLC2Q14093 348 aaPredicted RBP13.26□□□□□ -0.29
USB1-203ENST00000539737 TMEM44Q2T9K0 475 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 NDUFAF6Q330K2 333 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 RUNDC3AQ59EK9 446 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 HBMQ6B0K9 141 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 ADAM5Q6NVV9 412 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 CBLN3Q6UW01 205 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.26□□□□□ -0.29
USB1-203ENST00000539737 NUFIP2Q7Z417 695 aaKnown RBP13.26□□□□□ -0.29
USB1-203ENST00000539737 STK32CQ86UX6 486 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 PCYOX1LQ8NBM8 494 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 GMPPAQ96IJ6 420 aaPredicted RBP13.26□□□□□ -0.29
USB1-203ENST00000539737 QRSL1Q9H0R6 528 aaKnown RBP13.26□□□□□ -0.29
USB1-203ENST00000539737 BCL2L10Q9HD36 194 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 ARMCX1Q9P291 453 aa13.26□□□□□ -0.29
USB1-203ENST00000539737 GPC6Q9Y625 555 aaPredicted RBP13.26□□□□□ -0.29
USB1-203ENST00000539737 IGHV4-30-2A0A087WSY4 118 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 OVOL3O00110 214 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 FBP2O00757 339 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 OIP5O43482 229 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 CD5LO43866 347 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 RAMP1O60894 148 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 SS18L1O75177 396 aaPredicted RBP13.25□□□□□ -0.29
USB1-203ENST00000539737 CYP7B1O75881 506 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 THBS1P07996 1170 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 NUDT7P0C024 238 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 LINGO3P0C6S8 592 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 IL7RP16871 459 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 PGCP20142 388 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 EDNRAP25101 427 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 PGM1P36871 562 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 KCNJ10P78508 379 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 FOXF1Q12946 379 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 LARS2Q15031 903 aaKnown RBP13.25□□□□□ -0.29
USB1-203ENST00000539737 MAPK11Q15759 364 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 CYP51A1Q16850 503 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 ZSWIM7Q19AV6 140 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 KRTAP24-1Q3LI83 254 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 HIPK1Q86Z02 1210 aa13.25□□□□□ -0.29
USB1-203ENST00000539737 OR6K3Q8NGY3 331 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms