RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ZNF229Q9UJW7 825 aa9.31□□□□□ -0.92
SPARC-209ENST00000539687 POLHQ9Y253 713 aa9.31□□□□□ -0.92
SPARC-209ENST00000539687 HIF3AQ9Y2N7 669 aa9.31□□□□□ -0.92
SPARC-209ENST00000539687 PCDHGA5Q9Y5G8 931 aa9.31□□□□□ -0.92
SPARC-209ENST00000539687 NOX1Q9Y5S8 564 aa9.31□□□□□ -0.92
SPARC-209ENST00000539687 TRAV27A0A087WT01 109 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 TRDV1A0A1B0GX56 115 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 DAPL1A0PJW8 107 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 ISPDA4D126 451 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 OR2W5A6NFC9 320 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 IDSB3KWA1 339 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 C9J4A7 227 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 D6RAR5 112 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 J3QRE1 110 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 NTN3O00634 580 aaPredicted RBP9.3□□□□□ -0.92
SPARC-209ENST00000539687 HCRTR2O43614 444 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 ICOSLGO75144 302 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 ZFAND5O76080 213 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 PPP1R3DO95685 299 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 IGHEP01854 428 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 MT-ND5P03915 603 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 LIMS3P0CW19 117 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 LIMS4P0CW20 117 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 GP1BBP13224 206 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 F8A1P23610 371 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 CXCR1P25024 350 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 EVI2BP34910 448 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 CENPAP49450 140 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 PPP5CP53041 499 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 MLLT10P55197 1068 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 FXYD6P3P58550 94 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 RNF4P78317 190 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 MRPL28Q13084 256 aaKnown RBP9.3□□□□□ -0.92
SPARC-209ENST00000539687 SRSF5Q13243 272 aaKnown RBP9.3□□□□□ -0.92
SPARC-209ENST00000539687 GALEQ14376 348 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 GGTLC2Q14390 218 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 MFSD13AQ14CX5 517 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 PON3Q15166 354 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 INAQ16352 499 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 ZNF74Q16587 644 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 KLHL12Q53G59 568 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 PHF19Q5T6S3 580 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 GPR139Q6DWJ6 353 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 ZNF322Q6U7Q0 402 aaPredicted RBP9.3□□□□□ -0.92
SPARC-209ENST00000539687 CPEB2Q7Z5Q1 589 aaKnown RBP9.3□□□□□ -0.92
SPARC-209ENST00000539687 BCDIN3DQ7Z5W3 292 aaKnown RBP9.3□□□□□ -0.92
SPARC-209ENST00000539687 MAML2Q8IZL2 1156 aaPredicted RBP9.3□□□□□ -0.92
SPARC-209ENST00000539687 SLC15A4Q8N697 577 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 FAM98AQ8NCA5 519 aaKnown RBP9.3□□□□□ -0.92
SPARC-209ENST00000539687 SLC37A3Q8NCC5 494 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 PRSS33Q8NF86 280 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 SLC22A8Q8TCC7 542 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 CEP19Q96LK0 163 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 ERMAPQ96PL5 475 aaPredicted RBP9.3□□□□□ -0.92
SPARC-209ENST00000539687 TNFRSF13CQ96RJ3 184 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 MNTQ99583 582 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 CENPOQ9BU64 300 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 ADAM19Q9H013 955 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 NRIP3Q9NQ35 241 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 NANSQ9NR45 359 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 SDHAF3Q9NRP4 125 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 CHRNA9Q9UGM1 479 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 MOKQ9UQ07 419 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 CARD8Q9Y2G2 431 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 ADAMTS20P59510 1910 aa9.3□□□□□ -0.92
SPARC-209ENST00000539687 ZNF318Q5VUA4 2279 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 NINQ8N4C6 2090 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 TRAV36DV7A0A075B6V5 113 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 IQCMA0A1B0GVH7 501 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 LOC110117498-PIK3R3F6TDL0 507 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 FLRT2O43155 660 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 OR2T1O43869 369 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 GFRA3O60609 400 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 ADAM11O75078 769 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 TRIM3O75382 744 aaPredicted RBP9.29□□□□□ -0.92
SPARC-209ENST00000539687 RFPL3O75679 317 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 GPX5O75715 221 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 TXNDC12O95881 172 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 CD14P08571 375 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 SBK2P0C263 348 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 OR2T7P0C7T2 308 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 MYF5P13349 255 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 SLC2A5P22732 501 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 ITPKBP27987 946 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 MSX1P28360 303 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 ETV6P41212 452 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 SOX3P41225 446 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 CRYBB2P43320 205 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 POLR2HP52434 150 aaKnown RBP9.29□□□□□ -0.92
SPARC-209ENST00000539687 BLVRAP53004 296 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 SLC25A1P53007 311 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 SLC16A1P53985 500 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 C17orf67Q0P5P2 114 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 CRMP1Q14194 572 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 CD226Q15762 336 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 ZNF181Q2M3W8 571 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 SPANXN2Q5MJ10 180 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 PRAMEF17Q5VTA0 474 aa9.29□□□□□ -0.92
SPARC-209ENST00000539687 LIPKQ5VXJ0 399 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms