RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 H0YJX3 145 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 ADAMDEC1O15204 470 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 FMO6PO60774 539 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 IFNW1P05000 195 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 TPOP07202 933 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 GP1BBP13224 206 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 RHCEP18577 417 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 ELK4P28324 431 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 EIF1P41567 113 aaKnown RBP11.67□□□□□ -0.54
CCDC42-202ENST00000539522 CA7P43166 264 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 ARHGDIAP52565 204 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 CDH12P55289 794 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 RAC1P63000 192 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 LSM11P83369 360 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC42-202ENST00000539522 VLDLRP98155 873 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 BCL2A1Q16548 175 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 LRRC36Q1X8D7 754 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 WBP2NLQ6ICG8 309 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 PPP4R4Q6NUP7 873 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 POMZP3Q6PJE2 187 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 CLEC18BQ6UXF7 455 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 CADM2Q8N3J6 435 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 SVOPLQ8N434 492 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 PACRGLQ8N7B6 248 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 CLEC18CQ8NCF0 446 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 ICA1LQ8NDH6 482 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF563Q8TA94 476 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 SARAFQ96BY9 339 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 DNAJA3Q96EY1 480 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 ARL5BQ96KC2 179 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF300Q96RE9 604 aaPredicted RBP11.67□□□□□ -0.54
CCDC42-202ENST00000539522 DMRTA2Q96SC8 542 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 MCHR1Q99705 422 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 SRXN1Q9BYN0 137 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 EXO5Q9H790 373 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 MAN2C1Q9NTJ4 1040 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 NDUFAF4Q9P032 175 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 TMED7Q9Y3B3 224 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 AP4B1Q9Y6B7 739 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 ENPP4Q9Y6X5 453 aa11.67□□□□□ -0.54
CCDC42-202ENST00000539522 UTP20O75691 2785 aaKnown RBP11.67□□□□□ -0.54
CCDC42-202ENST00000539522 USP9XQ93008 2570 aaPredicted RBP11.67□□□□□ -0.54
CCDC42-202ENST00000539522 DOCK7Q96N67 2140 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 A0A1W2PNR3 127 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 CPSF4LA6NMK7 179 aaKnown RBP11.66□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF814B7Z6K7 855 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 G3V2T6 193 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 hCG_2039718K7EN88 272 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 TNFSF11O14788 317 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 BCKDKO14874 412 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 TGM6O95932 706 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 IMPDH2P12268 514 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 CCNA2P20248 432 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 POU3F2P20265 443 aaPredicted RBP11.66□□□□□ -0.54
CCDC42-202ENST00000539522 PTNP21246 168 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 PEX2P28328 305 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 SFTPDP35247 375 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 APOBEC1P41238 236 aaKnown RBP11.66□□□□□ -0.54
CCDC42-202ENST00000539522 YAP1P46937 504 aaKnown RBP11.66□□□□□ -0.54
CCDC42-202ENST00000539522 POLR2HP52434 150 aaKnown RBP11.66□□□□□ -0.54
CCDC42-202ENST00000539522 SRYQ05066 204 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 SELENBP1Q13228 472 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 PIN1Q13526 163 aaPredicted RBP11.66□□□□□ -0.54
CCDC42-202ENST00000539522 GK3PQ14409 553 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 CDSNQ15517 529 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 ACSF3Q4G176 576 aaPredicted RBP11.66□□□□□ -0.54
CCDC42-202ENST00000539522 CYP4Z1Q86W10 505 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 P3H2Q8IVL5 708 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 UBQLNLQ8IYU4 475 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 ATP6V1C2Q8NEY4 427 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 OR5K1Q8NHB7 308 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 ADAMTS16Q8TE57 1224 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 TMEM234Q8WY98 164 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 SMPDL3BQ92485 455 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 SLC38A4Q969I6 547 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 DTNBP1Q96EV8 351 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 NRBF2Q96F24 287 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF559Q9BR84 538 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 TACO1Q9BSH4 297 aaKnown RBP11.66□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF426Q9BUY5 554 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 PTDSS2Q9BVG9 487 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 OSBPL10Q9BXB5 764 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 CLCF1Q9UBD9 225 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 SH3BGRL2Q9UJC5 107 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 ACAD8Q9UKU7 415 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 CAMK2AQ9UQM7 478 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 COL12A1Q99715 3063 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 ESPL1Q14674 2120 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 MED12LQ86YW9 2145 aa11.66□□□□□ -0.54
CCDC42-202ENST00000539522 SAC3D1A6NKF1 404 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 LINC01387J3KSC0 135 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 SEC14L5O43304 696 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 FZD7O75084 574 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 DIRAS1O95057 198 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 ABOP16442 354 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 ZNF26P17031 533 aaPredicted RBP11.65□□□□□ -0.54
CCDC42-202ENST00000539522 DNAJA1P31689 397 aaKnown RBP11.65□□□□□ -0.54
CCDC42-202ENST00000539522 HMGA2P52926 109 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 SMIM11AP58511 58 aa11.65□□□□□ -0.54
CCDC42-202ENST00000539522 ADORA2A-AS1P86434 159 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms