RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 C1orf216Q8TAB5 229 aa16.42■□□□□ 0.22
GNE-204ENST00000539208 ABHD4Q8TB40 342 aa16.42■□□□□ 0.22
GNE-204ENST00000539208 LIPHQ8WWY8 451 aa16.42■□□□□ 0.22
GNE-204ENST00000539208 DEPDC7Q96QD5 511 aa16.42■□□□□ 0.22
GNE-204ENST00000539208 GPX7Q96SL4 187 aaPredicted RBP16.42■□□□□ 0.22
GNE-204ENST00000539208 DDOQ99489 341 aa16.42■□□□□ 0.22
GNE-204ENST00000539208 NRIP3Q9NQ35 241 aa16.42■□□□□ 0.22
GNE-204ENST00000539208 APEX1P27695 318 aaKnown RBP16.41■□□□□ 0.22
GNE-204ENST00000539208 PRPS1P60891 318 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 DBPQ10586 325 aaPredicted RBP16.41■□□□□ 0.22
GNE-204ENST00000539208 NR2C2APQ86WQ0 139 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 SYS1Q8N2H4 156 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 SDR9C7Q8NEX9 313 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 PGLYRP3Q96LB9 341 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 UBL7Q96S82 380 aaPredicted RBP16.41■□□□□ 0.22
GNE-204ENST00000539208 CNN2Q99439 309 aaKnown RBP16.41■□□□□ 0.22
GNE-204ENST00000539208 TMEM43Q9BTV4 400 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 C11orf54Q9H0W9 315 aaPredicted RBP16.41■□□□□ 0.22
GNE-204ENST00000539208 UBE2ZQ9H832 354 aaPredicted RBP16.41■□□□□ 0.22
GNE-204ENST00000539208 IGKV3D-11A0A0A0MRZ8 115 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 TMEM150CB9EJG8 249 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 PLA2G10O15496 165 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 ACTA2P62736 377 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 ACTG2P63267 376 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 RPL6Q02878 288 aaKnown RBP16.41■□□□□ 0.22
GNE-204ENST00000539208 SLC35D3Q5M8T2 416 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 NKAIN2Q5VXU1 208 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 RDH10Q8IZV5 341 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 NPEPL1Q8NDH3 523 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 MAU2Q9Y6X3 613 aa16.41■□□□□ 0.22
GNE-204ENST00000539208 IGKV1D-42A0A075B6H8 117 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 OGG1O15527 345 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 OR2B3O76000 313 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 CD1AP06126 327 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 SLC2A2P11168 524 aaPredicted RBP16.4■□□□□ 0.22
GNE-204ENST00000539208 UBL4AP11441 157 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 RORAP35398 523 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 RPL4P36578 427 aaKnown RBP16.4■□□□□ 0.22
GNE-204ENST00000539208 DIO1P49895 249 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 HSD11B2P80365 405 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 SKP2Q13309 424 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 UBXN2BQ14CS0 331 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 PON3Q15166 354 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 ATG4DQ86TL0 474 aaPredicted RBP16.4■□□□□ 0.22
GNE-204ENST00000539208 TMEM151BQ8IW70 566 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 Q8N402 240 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 NLGN4YQ8NFZ3 816 aaPredicted RBP16.4■□□□□ 0.22
GNE-204ENST00000539208 OR14A16Q8NHC5 309 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 NMNAT2Q9BZQ4 307 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 PPIL3Q9H2H8 161 aaKnown RBP16.4■□□□□ 0.22
GNE-204ENST00000539208 ST6GALNAC2Q9UJ37 374 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 MRTO4Q9UKD2 239 aaKnown RBP16.4■□□□□ 0.22
GNE-204ENST00000539208 RNF215Q9Y6U7 377 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.4■□□□□ 0.22
GNE-204ENST00000539208 FRG2CA6NGY1 282 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 ATP6V1G1O75348 118 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 TFP02787 698 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 IGKV3-11P04433 115 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 SHC1P29353 583 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 LCN1P31025 176 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 SLC3A1Q07837 685 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 IL10RAQ13651 578 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 KCNJ8Q15842 424 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 TTLL10Q6ZVT0 673 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 SSX6Q7RTT6 188 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 CEACAM19Q7Z692 300 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 C17orf47Q8NEP4 570 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 OR5J2Q8NH18 312 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 ZMYND19Q96E35 227 aaPredicted RBP16.4■□□□□ 0.22
GNE-204ENST00000539208 LMF1Q96S06 567 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 TTYH2Q9BSA4 534 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 PNO1Q9NRX1 252 aaKnown RBP16.4■□□□□ 0.22
GNE-204ENST00000539208 ADAM18Q9Y3Q7 739 aa16.4■□□□□ 0.22
GNE-204ENST00000539208 KNL1Q8NG31 2342 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 ELOA3DA6NLF2 546 aaPredicted RBP16.39■□□□□ 0.21
GNE-204ENST00000539208 LRRN3E7EW58 273 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 SCDO00767 359 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 CCNKO75909 580 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 PIAS2O75928 621 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 SERPINA3P01011 423 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 HPGDP15428 266 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 MYL9P24844 172 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 PYCR1P32322 319 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 DAB2P98082 770 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 IL18Q14116 193 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 KCNAB1Q14722 419 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 CD226Q15762 336 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 SMAD2Q15796 467 aaKnown RBP16.39■□□□□ 0.21
GNE-204ENST00000539208 ELOA3BQ3SY89 546 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 CDONQ4KMG0 1287 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 PAMR1Q6UXH9 720 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 NUP54Q7Z3B4 507 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 ELOA3Q8NG57 546 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 SMAP2Q8WU79 429 aaPredicted RBP16.39■□□□□ 0.21
GNE-204ENST00000539208 ZC3HAV1LQ96H79 300 aaKnown RBP16.39■□□□□ 0.21
GNE-204ENST00000539208 LCORQ96JN0 433 aaPredicted RBP16.39■□□□□ 0.21
GNE-204ENST00000539208 NXF5Q9H1B4 397 aaKnown RBP16.39■□□□□ 0.21
GNE-204ENST00000539208 LRRN3Q9H3W5 708 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 UCKL1Q9NWZ5 548 aa16.39■□□□□ 0.21
GNE-204ENST00000539208 SPTBP11277 2137 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms